Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SH3KBP1Q96B97 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.91■□□□□ 0.14
SH3KBP1Q96B97 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SH3KBP1Q96B97 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SH3KBP1Q96B97 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.91■□□□□ 0.14
SH3KBP1Q96B97 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SH3KBP1Q96B97 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SH3KBP1Q96B97 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SH3KBP1Q96B97 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SH3KBP1Q96B97 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SH3KBP1Q96B97 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
SH3KBP1Q96B97 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.91■□□□□ 0.14
SH3KBP1Q96B97 U82695.1-201ENST00000635752 1889 ntBASIC15.91■□□□□ 0.14
SH3KBP1Q96B97 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.91■□□□□ 0.14
SH3KBP1Q96B97 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SH3KBP1Q96B97 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 AC241585.1-201ENST00000433527 519 ntBASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 MIR4745-201ENST00000577608 62 ntBASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 AL390754.1-201ENST00000619088 582 ntBASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SH3KBP1Q96B97 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
SH3KBP1Q96B97 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
SH3KBP1Q96B97 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 AC027369.6-201ENST00000525520 931 ntBASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
SH3KBP1Q96B97 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SH3KBP1Q96B97 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms