Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 AP005117.1-202ENST00000581724 1908 ntBASIC15.67■□□□□ 0.1
ATL1Q8WXF7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 AC004987.2-201ENST00000395959 1148 ntBASIC15.67■□□□□ 0.1
ATL1Q8WXF7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATL1Q8WXF7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 AC099063.4-201ENST00000641099 1602 ntBASIC15.66■□□□□ 0.1
ATL1Q8WXF7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 AC254562.1-201ENST00000417586 456 ntBASIC15.66■□□□□ 0.1
ATL1Q8WXF7 RPS8P6-201ENST00000426177 609 ntBASIC15.66■□□□□ 0.1
ATL1Q8WXF7 AL353705.2-201ENST00000428243 662 ntBASIC15.66■□□□□ 0.1
ATL1Q8WXF7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 ALG1L8P-201ENST00000533887 760 ntBASIC15.66■□□□□ 0.1
ATL1Q8WXF7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 PAUPAR-201ENST00000630360 2965 ntBASIC15.66■□□□□ 0.1
ATL1Q8WXF7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATL1Q8WXF7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATL1Q8WXF7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ATL1Q8WXF7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.65■□□□□ 0.1
ATL1Q8WXF7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATL1Q8WXF7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATL1Q8WXF7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms