Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF550Q7Z398 FOXO1B-201ENST00000504678 1527 ntBASIC14.77□□□□□ -0.04
ZNF550Q7Z398 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
ZNF550Q7Z398 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
ZNF550Q7Z398 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.77□□□□□ -0.04
ZNF550Q7Z398 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF550Q7Z398 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF550Q7Z398 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.77□□□□□ -0.04
ZNF550Q7Z398 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF550Q7Z398 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF550Q7Z398 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF550Q7Z398 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF550Q7Z398 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.77□□□□□ -0.04
ZNF550Q7Z398 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF550Q7Z398 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF550Q7Z398 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 MIR346-201ENST00000362234 95 ntBASIC14.77□□□□□ -0.05
ZNF550Q7Z398 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 HLA-H-201ENST00000383620 1096 ntBASIC14.77□□□□□ -0.05
ZNF550Q7Z398 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 SPCS2P4-201ENST00000436160 681 ntBASIC14.77□□□□□ -0.05
ZNF550Q7Z398 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 AC079140.1-201ENST00000508039 487 ntBASIC14.77□□□□□ -0.05
ZNF550Q7Z398 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 AP000842.3-202ENST00000569238 1080 ntBASIC14.77□□□□□ -0.05
ZNF550Q7Z398 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 PRAL-201ENST00000624952 3286 ntBASIC14.77□□□□□ -0.05
ZNF550Q7Z398 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF550Q7Z398 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 AC132872.4-202ENST00000622924 2756 ntBASIC14.76□□□□□ -0.05
ZNF550Q7Z398 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 KRT8P48-201ENST00000515599 1220 ntBASIC14.76□□□□□ -0.05
ZNF550Q7Z398 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF550Q7Z398 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms