Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SCXQ7RTU7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 CD99-202ENST00000381180 530 ntTSL 2 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 HLA-DRB6-201ENST00000411500 1235 ntBASIC10.68□□□□□ -0.7
SCXQ7RTU7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 DUX4L17-201ENST00000557360 1267 ntBASIC10.68□□□□□ -0.7
SCXQ7RTU7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 AL513523.2-202ENST00000427283 2040 ntBASIC10.68□□□□□ -0.7
SCXQ7RTU7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SCXQ7RTU7 AL353732.1-201ENST00000569618 1459 ntBASIC10.68□□□□□ -0.7
SCXQ7RTU7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SCXQ7RTU7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
SCXQ7RTU7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SCXQ7RTU7 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SCXQ7RTU7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC10.67□□□□□ -0.7
SCXQ7RTU7 AC126335.2-201ENST00000623362 4637 ntBASIC10.67□□□□□ -0.7
SCXQ7RTU7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SCXQ7RTU7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SCXQ7RTU7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SCXQ7RTU7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SCXQ7RTU7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SCXQ7RTU7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
SCXQ7RTU7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
SCXQ7RTU7 AC092068.3-201ENST00000587894 2016 ntBASIC10.67□□□□□ -0.7
SCXQ7RTU7 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SCXQ7RTU7 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SCXQ7RTU7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SCXQ7RTU7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC10.67□□□□□ -0.7
SCXQ7RTU7 AKAP8P1-201ENST00000434743 1349 ntBASIC10.67□□□□□ -0.7
SCXQ7RTU7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SCXQ7RTU7 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SCXQ7RTU7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC10.67□□□□□ -0.7
SCXQ7RTU7 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SCXQ7RTU7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC10.67□□□□□ -0.7
SCXQ7RTU7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
SCXQ7RTU7 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SCXQ7RTU7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SCXQ7RTU7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SCXQ7RTU7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC10.67□□□□□ -0.7
SCXQ7RTU7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
SCXQ7RTU7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SCXQ7RTU7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SCXQ7RTU7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SCXQ7RTU7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms