Protein–RNA interactions for Protein: Q3BBW0

NBPF9, Neuroblastoma breakpoint family member 9, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF9Q3BBW0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
NBPF9Q3BBW0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NBPF9Q3BBW0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
NBPF9Q3BBW0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
NBPF9Q3BBW0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NBPF9Q3BBW0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
NBPF9Q3BBW0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 AC008687.7-202ENST00000637404 953 ntBASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 AC084018.2-201ENST00000613093 2607 ntBASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 PCDHA12-202ENST00000613593 2588 ntBASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.87■□□□□ 0.61
NBPF9Q3BBW0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 REXO1L1P-202ENST00000608646 1974 ntBASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 AC136604.1-201ENST00000418535 575 ntBASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 HNRNPUP1-201ENST00000554987 333 ntBASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 AL118558.3-201ENST00000607414 1079 ntBASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.86■□□□□ 0.61
NBPF9Q3BBW0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NBPF9Q3BBW0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NBPF9Q3BBW0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NBPF9Q3BBW0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.85■□□□□ 0.61
NBPF9Q3BBW0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NBPF9Q3BBW0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NBPF9Q3BBW0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.85■□□□□ 0.61
NBPF9Q3BBW0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.85■□□□□ 0.61
NBPF9Q3BBW0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NBPF9Q3BBW0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NBPF9Q3BBW0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NBPF9Q3BBW0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms