Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS1BP61024 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CKS1BP61024 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
CKS1BP61024 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CKS1BP61024 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.31□□□□□ -0.6
CKS1BP61024 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.31□□□□□ -0.6
CKS1BP61024 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
CKS1BP61024 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC11.31□□□□□ -0.6
CKS1BP61024 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
CKS1BP61024 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CKS1BP61024 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
CKS1BP61024 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC11.31□□□□□ -0.6
CKS1BP61024 AC246785.2-201ENST00000432512 513 ntBASIC11.31□□□□□ -0.6
CKS1BP61024 KRT18P57-201ENST00000443599 1254 ntBASIC11.31□□□□□ -0.6
CKS1BP61024 MEG3-211ENST00000452514 461 ntTSL 3 BASIC11.31□□□□□ -0.6
CKS1BP61024 AL671277.2-201ENST00000458060 996 ntBASIC11.31□□□□□ -0.6
CKS1BP61024 HLA-J-202ENST00000469281 1241 ntBASIC11.31□□□□□ -0.6
CKS1BP61024 RN7SL606P-201ENST00000472779 293 ntBASIC11.31□□□□□ -0.6
CKS1BP61024 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CKS1BP61024 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC11.31□□□□□ -0.6
CKS1BP61024 AC011498.5-201ENST00000592027 486 ntBASIC11.31□□□□□ -0.6
CKS1BP61024 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
CKS1BP61024 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
CKS1BP61024 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
CKS1BP61024 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CKS1BP61024 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CKS1BP61024 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 AC006538.1-201ENST00000567905 1585 ntBASIC11.31□□□□□ -0.6
CKS1BP61024 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
CKS1BP61024 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CKS1BP61024 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
CKS1BP61024 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC11.31□□□□□ -0.6
CKS1BP61024 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC11.31□□□□□ -0.6
CKS1BP61024 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC11.31□□□□□ -0.6
CKS1BP61024 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC11.31□□□□□ -0.6
CKS1BP61024 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
CKS1BP61024 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
CKS1BP61024 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS1BP61024 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS1BP61024 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC11.3□□□□□ -0.6
CKS1BP61024 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS1BP61024 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS1BP61024 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.3□□□□□ -0.6
CKS1BP61024 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC11.3□□□□□ -0.6
CKS1BP61024 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC11.3□□□□□ -0.6
CKS1BP61024 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS1BP61024 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
CKS1BP61024 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC11.3□□□□□ -0.6
CKS1BP61024 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
CKS1BP61024 CES1P1-201ENST00000421606 1704 ntBASIC11.3□□□□□ -0.6
CKS1BP61024 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS1BP61024 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms