Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 AL591846.1-201ENST00000451736 433 ntBASIC13.33□□□□□ -0.28
RIPPLY3P57055 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 AL133215.2-201ENST00000609242 977 ntBASIC13.33□□□□□ -0.28
RIPPLY3P57055 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RIPPLY3P57055 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RIPPLY3P57055 AC063926.3-201ENST00000624734 5658 ntBASIC13.33□□□□□ -0.28
RIPPLY3P57055 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.32□□□□□ -0.28
RIPPLY3P57055 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 AC010234.1-201ENST00000494599 870 ntBASIC13.32□□□□□ -0.28
RIPPLY3P57055 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.32□□□□□ -0.28
RIPPLY3P57055 AC134698.3-201ENST00000523880 214 ntBASIC13.32□□□□□ -0.28
RIPPLY3P57055 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RIPPLY3P57055 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RIPPLY3P57055 AL118508.1-201ENST00000613502 2345 ntBASIC13.31□□□□□ -0.28
RIPPLY3P57055 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.31□□□□□ -0.28
RIPPLY3P57055 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RIPPLY3P57055 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms