Protein–RNA interactions for Protein: P46094

XCR1, Chemokine XC receptor 1, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1P46094 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
XCR1P46094 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
XCR1P46094 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
XCR1P46094 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XCR1P46094 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XCR1P46094 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.28■□□□□ 0.04
XCR1P46094 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XCR1P46094 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XCR1P46094 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XCR1P46094 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
XCR1P46094 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XCR1P46094 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XCR1P46094 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.28■□□□□ 0.04
XCR1P46094 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
XCR1P46094 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XCR1P46094 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
XCR1P46094 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
XCR1P46094 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
XCR1P46094 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
XCR1P46094 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.27■□□□□ 0.04
XCR1P46094 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.27■□□□□ 0.04
XCR1P46094 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
XCR1P46094 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.27■□□□□ 0.04
XCR1P46094 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
XCR1P46094 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
XCR1P46094 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
XCR1P46094 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
XCR1P46094 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
XCR1P46094 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
XCR1P46094 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
XCR1P46094 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
XCR1P46094 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
XCR1P46094 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
XCR1P46094 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
XCR1P46094 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
XCR1P46094 AC069224.1-201ENST00000566372 1715 ntBASIC15.27■□□□□ 0.04
XCR1P46094 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
XCR1P46094 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
XCR1P46094 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
XCR1P46094 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
XCR1P46094 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.27■□□□□ 0.04
XCR1P46094 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.27■□□□□ 0.04
XCR1P46094 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.27■□□□□ 0.04
XCR1P46094 HMGN1P19-201ENST00000436976 333 ntBASIC15.27■□□□□ 0.04
XCR1P46094 AC093214.1-201ENST00000511688 1107 ntBASIC15.27■□□□□ 0.04
XCR1P46094 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.27■□□□□ 0.04
XCR1P46094 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.27■□□□□ 0.04
XCR1P46094 AL390754.1-201ENST00000619088 582 ntBASIC15.27■□□□□ 0.04
XCR1P46094 AC073592.8-201ENST00000624126 511 ntBASIC15.27■□□□□ 0.04
XCR1P46094 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
XCR1P46094 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
XCR1P46094 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
XCR1P46094 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.27■□□□□ 0.03
XCR1P46094 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
XCR1P46094 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
XCR1P46094 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
XCR1P46094 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.27■□□□□ 0.03
XCR1P46094 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
XCR1P46094 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.27■□□□□ 0.03
XCR1P46094 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.27■□□□□ 0.03
XCR1P46094 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.27■□□□□ 0.03
XCR1P46094 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
XCR1P46094 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
XCR1P46094 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
XCR1P46094 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
XCR1P46094 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XCR1P46094 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
XCR1P46094 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XCR1P46094 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.26■□□□□ 0.03
XCR1P46094 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.26■□□□□ 0.03
XCR1P46094 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XCR1P46094 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
XCR1P46094 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XCR1P46094 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
XCR1P46094 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.26■□□□□ 0.03
XCR1P46094 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.26■□□□□ 0.03
XCR1P46094 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
XCR1P46094 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XCR1P46094 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.26■□□□□ 0.03
XCR1P46094 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.26■□□□□ 0.03
XCR1P46094 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.26■□□□□ 0.03
XCR1P46094 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XCR1P46094 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.26■□□□□ 0.03
XCR1P46094 AC097493.3-201ENST00000509725 367 ntBASIC15.26■□□□□ 0.03
XCR1P46094 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.26■□□□□ 0.03
XCR1P46094 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.26■□□□□ 0.03
XCR1P46094 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
XCR1P46094 AL390955.2-201ENST00000603032 514 ntBASIC15.26■□□□□ 0.03
XCR1P46094 AL589739.1-201ENST00000607720 493 ntBASIC15.26■□□□□ 0.03
XCR1P46094 SPDYE12P-201ENST00000618416 771 ntBASIC15.26■□□□□ 0.03
XCR1P46094 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XCR1P46094 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XCR1P46094 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XCR1P46094 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
XCR1P46094 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XCR1P46094 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
XCR1P46094 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
XCR1P46094 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
XCR1P46094 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.26■□□□□ 0.03
XCR1P46094 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms