Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LAMP1P11279 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LAMP1P11279 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.17■□□□□ 0.02
LAMP1P11279 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.17■□□□□ 0.02
LAMP1P11279 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.17■□□□□ 0.02
LAMP1P11279 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LAMP1P11279 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LAMP1P11279 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 REXO1L1P-202ENST00000608646 1974 ntBASIC15.17■□□□□ 0.02
LAMP1P11279 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.17■□□□□ 0.02
LAMP1P11279 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.17■□□□□ 0.02
LAMP1P11279 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LAMP1P11279 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 MIR346-201ENST00000362234 95 ntBASIC15.17■□□□□ 0.02
LAMP1P11279 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.17■□□□□ 0.02
LAMP1P11279 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 SPCS2P4-201ENST00000436160 681 ntBASIC15.17■□□□□ 0.02
LAMP1P11279 SPDYE11-202ENST00000450699 704 ntBASIC15.17■□□□□ 0.02
LAMP1P11279 RN7SL589P-201ENST00000481268 310 ntBASIC15.17■□□□□ 0.02
LAMP1P11279 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.17■□□□□ 0.02
LAMP1P11279 KRT8P48-201ENST00000515599 1220 ntBASIC15.17■□□□□ 0.02
LAMP1P11279 AP000842.3-202ENST00000569238 1080 ntBASIC15.17■□□□□ 0.02
LAMP1P11279 SPDYE9P-201ENST00000570642 692 ntBASIC15.17■□□□□ 0.02
LAMP1P11279 SPDYE10P-202ENST00000612005 668 ntBASIC15.17■□□□□ 0.02
LAMP1P11279 SPDYE8P-202ENST00000612377 668 ntBASIC15.17■□□□□ 0.02
LAMP1P11279 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.17■□□□□ 0.02
LAMP1P11279 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
LAMP1P11279 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.17■□□□□ 0.02
LAMP1P11279 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 AC023824.1-201ENST00000562945 2975 ntBASIC15.17■□□□□ 0.02
LAMP1P11279 AL136982.4-201ENST00000437689 1740 ntBASIC15.17■□□□□ 0.02
LAMP1P11279 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
LAMP1P11279 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.17■□□□□ 0.02
LAMP1P11279 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LAMP1P11279 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.17■□□□□ 0.02
LAMP1P11279 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
LAMP1P11279 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
LAMP1P11279 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LAMP1P11279 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.16■□□□□ 0.02
LAMP1P11279 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
LAMP1P11279 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LAMP1P11279 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LAMP1P11279 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LAMP1P11279 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.16■□□□□ 0.02
LAMP1P11279 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LAMP1P11279 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
LAMP1P11279 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LAMP1P11279 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
LAMP1P11279 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LAMP1P11279 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LAMP1P11279 FAM220BP-201ENST00000377689 816 ntBASIC15.16■□□□□ 0.02
LAMP1P11279 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.16■□□□□ 0.02
LAMP1P11279 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.16■□□□□ 0.02
LAMP1P11279 MCCD1P2-201ENST00000423228 335 ntBASIC15.16■□□□□ 0.02
LAMP1P11279 AC079140.1-201ENST00000508039 487 ntBASIC15.16■□□□□ 0.02
LAMP1P11279 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.16■□□□□ 0.02
LAMP1P11279 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.16■□□□□ 0.02
LAMP1P11279 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.16■□□□□ 0.02
LAMP1P11279 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.16■□□□□ 0.02
LAMP1P11279 AC040169.1-201ENST00000565382 521 ntBASIC15.16■□□□□ 0.02
LAMP1P11279 MIR4313-201ENST00000580760 101 ntBASIC15.16■□□□□ 0.02
LAMP1P11279 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.16■□□□□ 0.02
LAMP1P11279 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.16■□□□□ 0.02
LAMP1P11279 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.16■□□□□ 0.02
LAMP1P11279 AC026120.1-201ENST00000611536 926 ntBASIC15.16■□□□□ 0.02
LAMP1P11279 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.16■□□□□ 0.02
LAMP1P11279 AC009090.5-201ENST00000624886 2285 ntBASIC15.16■□□□□ 0.02
LAMP1P11279 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LAMP1P11279 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LAMP1P11279 AC023157.3-201ENST00000619086 2088 ntBASIC15.16■□□□□ 0.02
LAMP1P11279 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.16■□□□□ 0.02
LAMP1P11279 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LAMP1P11279 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LAMP1P11279 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LAMP1P11279 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LAMP1P11279 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LAMP1P11279 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.16■□□□□ 0.02
LAMP1P11279 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.16■□□□□ 0.02
LAMP1P11279 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LAMP1P11279 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms