Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
CHD1O14646 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CHD1O14646 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CHD1O14646 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CHD1O14646 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CHD1O14646 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CHD1O14646 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC25.11■■□□□ 1.61
CHD1O14646 ALG1L13P-202ENST00000519320 584 ntBASIC25.11■■□□□ 1.61
CHD1O14646 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
CHD1O14646 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CHD1O14646 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC25.1■■□□□ 1.61
CHD1O14646 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
CHD1O14646 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHD1O14646 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CHD1O14646 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHD1O14646 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CHD1O14646 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC25.1■■□□□ 1.61
CHD1O14646 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC25.1■■□□□ 1.61
CHD1O14646 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC25.1■■□□□ 1.61
CHD1O14646 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CHD1O14646 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC25.1■■□□□ 1.61
CHD1O14646 AL162426.1-201ENST00000624141 743 ntBASIC25.1■■□□□ 1.61
CHD1O14646 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CHD1O14646 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHD1O14646 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
CHD1O14646 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHD1O14646 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHD1O14646 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC25.1■■□□□ 1.61
CHD1O14646 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHD1O14646 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC25.09■■□□□ 1.61
CHD1O14646 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD1O14646 SAMD11P1-201ENST00000571429 661 ntBASIC25.09■■□□□ 1.61
CHD1O14646 EIF5AP2-201ENST00000585668 1047 ntBASIC25.09■■□□□ 1.61
CHD1O14646 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC25.09■■□□□ 1.61
CHD1O14646 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CHD1O14646 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CHD1O14646 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
CHD1O14646 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD1O14646 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD1O14646 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
CHD1O14646 AC020916.1-201ENST00000587762 1774 ntBASIC25.09■■□□□ 1.61
CHD1O14646 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
CHD1O14646 LSM5-207ENST00000410044 687 ntTSL 3 BASIC25.09■■□□□ 1.61
CHD1O14646 AC104073.2-201ENST00000453737 312 ntBASIC25.09■■□□□ 1.61
CHD1O14646 HLA-J-204ENST00000495278 958 ntBASIC25.09■■□□□ 1.61
CHD1O14646 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC25.09■■□□□ 1.61
CHD1O14646 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC25.09■■□□□ 1.61
CHD1O14646 AL118516.1-201ENST00000564152 670 ntBASIC25.09■■□□□ 1.61
CHD1O14646 AL132994.2-201ENST00000603120 687 ntBASIC25.09■■□□□ 1.61
CHD1O14646 AL358472.3-201ENST00000608147 415 ntBASIC25.09■■□□□ 1.61
CHD1O14646 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD1O14646 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD1O14646 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CHD1O14646 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD1O14646 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CHD1O14646 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CHD1O14646 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CHD1O14646 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CHD1O14646 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC25.08■■□□□ 1.61
CHD1O14646 MIR4683-201ENST00000579659 81 ntBASIC25.08■■□□□ 1.61
CHD1O14646 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CHD1O14646 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC25.08■■□□□ 1.61
CHD1O14646 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
CHD1O14646 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC25.08■■□□□ 1.6
CHD1O14646 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CHD1O14646 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC25.08■■□□□ 1.6
CHD1O14646 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC25.08■■□□□ 1.6
CHD1O14646 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC25.07■■□□□ 1.6
CHD1O14646 LRRFIP1P1-201ENST00000498774 2246 ntBASIC25.07■■□□□ 1.6
CHD1O14646 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD1O14646 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD1O14646 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD1O14646 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD1O14646 DNM1P51-201ENST00000558149 522 ntBASIC25.07■■□□□ 1.6
CHD1O14646 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC25.07■■□□□ 1.6
CHD1O14646 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC25.07■■□□□ 1.6
CHD1O14646 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC25.07■■□□□ 1.6
CHD1O14646 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD1O14646 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD1O14646 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD1O14646 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC25.07■■□□□ 1.6
CHD1O14646 AC004408.2-201ENST00000623613 2777 ntBASIC25.07■■□□□ 1.6
CHD1O14646 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD1O14646 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CHD1O14646 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD1O14646 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC25.07■■□□□ 1.6
CHD1O14646 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC25.07■■□□□ 1.6
CHD1O14646 AMT-224ENST00000635808 1610 ntTSL 5 BASIC25.06■■□□□ 1.6
CHD1O14646 CLUHP2-201ENST00000426660 1303 ntBASIC25.06■■□□□ 1.6
CHD1O14646 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CHD1O14646 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD1O14646 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC25.06■■□□□ 1.6
CHD1O14646 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC25.06■■□□□ 1.6
CHD1O14646 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CHD1O14646 AC005618.3-201ENST00000624928 458 ntBASIC25.06■■□□□ 1.6
CHD1O14646 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
CHD1O14646 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD1O14646 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CHD1O14646 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC25.06■■□□□ 1.6
CHD1O14646 AL158070.2-201ENST00000623713 1621 ntBASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms