Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 AC092474.2-201ENST00000424288 719 ntBASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 PRSS29P-201ENST00000440800 595 ntBASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 AL138918.1-201ENST00000568306 659 ntBASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 AL645728.2-201ENST00000641974 660 ntBASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 AL355385.1-201ENST00000606123 409 ntBASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 BX640515.1-201ENST00000617215 977 ntBASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHAMP1Q96JM3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHAMP1Q96JM3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHAMP1Q96JM3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CHAMP1Q96JM3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHAMP1Q96JM3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHAMP1Q96JM3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHAMP1Q96JM3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHAMP1Q96JM3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHAMP1Q96JM3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHAMP1Q96JM3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHAMP1Q96JM3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC18.58■□□□□ 0.57
CHAMP1Q96JM3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHAMP1Q96JM3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHAMP1Q96JM3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHAMP1Q96JM3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.58■□□□□ 0.57
CHAMP1Q96JM3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 RNA5SP415-201ENST00000517246 115 ntBASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 AGAP7P-201ENST00000582299 2062 ntBASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 AGAP14-201ENST00000624701 2060 ntBASIC18.58■□□□□ 0.56
CHAMP1Q96JM3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHAMP1Q96JM3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms