Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCE1Q969G3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCE1Q969G3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SMARCE1Q969G3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCE1Q969G3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCE1Q969G3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.11■□□□□ 0.49
SMARCE1Q969G3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCE1Q969G3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.11■□□□□ 0.49
SMARCE1Q969G3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCE1Q969G3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 AC007967.2-201ENST00000432613 625 ntBASIC18.1■□□□□ 0.49
SMARCE1Q969G3 KRT18P2-201ENST00000447938 1258 ntBASIC18.1■□□□□ 0.49
SMARCE1Q969G3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCE1Q969G3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 AC020658.6-201ENST00000623564 1870 ntBASIC18.09■□□□□ 0.49
SMARCE1Q969G3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 AP001282.1-201ENST00000531301 1499 ntBASIC18.09■□□□□ 0.49
SMARCE1Q969G3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 SSR4P1-203ENST00000599569 2260 ntBASIC18.09■□□□□ 0.49
SMARCE1Q969G3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 AC068137.2-201ENST00000605408 478 ntBASIC18.09■□□□□ 0.49
SMARCE1Q969G3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 CICP13-201ENST00000422015 2789 ntBASIC18.09■□□□□ 0.49
SMARCE1Q969G3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCE1Q969G3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMARCE1Q969G3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMARCE1Q969G3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMARCE1Q969G3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.08■□□□□ 0.49
SMARCE1Q969G3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SMARCE1Q969G3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMARCE1Q969G3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SMARCE1Q969G3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SMARCE1Q969G3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
SMARCE1Q969G3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.08■□□□□ 0.49
SMARCE1Q969G3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms