Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC00242Q5T6M2 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC11□□□□□ -0.65
LINC00242Q5T6M2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 CICP23-201ENST00000605013 2741 ntBASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 MRPL20P1-201ENST00000400819 433 ntBASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 HIST2H3DP1-201ENST00000401004 416 ntBASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 REXO1L6P-202ENST00000619970 1078 ntBASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 MIR1199-201ENST00000621445 119 ntBASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 AC023908.3-201ENST00000564211 3047 ntBASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
LINC00242Q5T6M2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00242Q5T6M2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms