Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ATP1B3P54709 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
ATP1B3P54709 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ATP1B3P54709 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ATP1B3P54709 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.98□□□□□ -0.17
ATP1B3P54709 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
ATP1B3P54709 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
ATP1B3P54709 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ATP1B3P54709 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.98□□□□□ -0.17
ATP1B3P54709 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATP1B3P54709 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.98□□□□□ -0.17
ATP1B3P54709 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATP1B3P54709 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATP1B3P54709 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
ATP1B3P54709 PPT1-215ENST00000641471 2368 ntBASIC13.97□□□□□ -0.17
ATP1B3P54709 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.97□□□□□ -0.17
ATP1B3P54709 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.97□□□□□ -0.17
ATP1B3P54709 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATP1B3P54709 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATP1B3P54709 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATP1B3P54709 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.97□□□□□ -0.17
ATP1B3P54709 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ATP1B3P54709 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATP1B3P54709 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATP1B3P54709 AC092474.2-201ENST00000424288 719 ntBASIC13.97□□□□□ -0.17
ATP1B3P54709 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATP1B3P54709 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.97□□□□□ -0.17
ATP1B3P54709 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.97□□□□□ -0.17
ATP1B3P54709 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.97□□□□□ -0.17
ATP1B3P54709 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.97□□□□□ -0.17
ATP1B3P54709 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.97□□□□□ -0.17
ATP1B3P54709 AL078644.1-201ENST00000609881 752 ntBASIC13.97□□□□□ -0.17
ATP1B3P54709 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATP1B3P54709 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATP1B3P54709 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATP1B3P54709 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATP1B3P54709 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ATP1B3P54709 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATP1B3P54709 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATP1B3P54709 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATP1B3P54709 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.97□□□□□ -0.17
ATP1B3P54709 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATP1B3P54709 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.97□□□□□ -0.17
ATP1B3P54709 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.97□□□□□ -0.17
ATP1B3P54709 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ATP1B3P54709 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ATP1B3P54709 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ATP1B3P54709 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ATP1B3P54709 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
ATP1B3P54709 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATP1B3P54709 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ATP1B3P54709 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATP1B3P54709 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ATP1B3P54709 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATP1B3P54709 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
ATP1B3P54709 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.96□□□□□ -0.17
ATP1B3P54709 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
ATP1B3P54709 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.96□□□□□ -0.17
ATP1B3P54709 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATP1B3P54709 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ATP1B3P54709 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ATP1B3P54709 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.96□□□□□ -0.17
ATP1B3P54709 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATP1B3P54709 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.96□□□□□ -0.17
ATP1B3P54709 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATP1B3P54709 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATP1B3P54709 HAUS4P1-201ENST00000406739 1145 ntBASIC13.96□□□□□ -0.17
ATP1B3P54709 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.96□□□□□ -0.17
ATP1B3P54709 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ATP1B3P54709 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.96□□□□□ -0.17
ATP1B3P54709 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.96□□□□□ -0.17
ATP1B3P54709 RNA5SP419-201ENST00000515908 135 ntBASIC13.96□□□□□ -0.17
ATP1B3P54709 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.96□□□□□ -0.17
ATP1B3P54709 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.96□□□□□ -0.17
ATP1B3P54709 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATP1B3P54709 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
ATP1B3P54709 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ATP1B3P54709 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.96□□□□□ -0.17
ATP1B3P54709 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.96□□□□□ -0.17
ATP1B3P54709 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.96□□□□□ -0.17
ATP1B3P54709 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATP1B3P54709 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATP1B3P54709 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ATP1B3P54709 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
ATP1B3P54709 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ATP1B3P54709 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ATP1B3P54709 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ATP1B3P54709 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ATP1B3P54709 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
ATP1B3P54709 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
ATP1B3P54709 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.95□□□□□ -0.18
ATP1B3P54709 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms