Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
EPHA3P29320 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
EPHA3P29320 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EPHA3P29320 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHA3P29320 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
EPHA3P29320 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.63■□□□□ 0.09
EPHA3P29320 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
EPHA3P29320 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
EPHA3P29320 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.63■□□□□ 0.09
EPHA3P29320 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.63■□□□□ 0.09
EPHA3P29320 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.63■□□□□ 0.09
EPHA3P29320 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.63■□□□□ 0.09
EPHA3P29320 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
EPHA3P29320 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
EPHA3P29320 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.63■□□□□ 0.09
EPHA3P29320 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.63■□□□□ 0.09
EPHA3P29320 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.63■□□□□ 0.09
EPHA3P29320 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.63■□□□□ 0.09
EPHA3P29320 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
EPHA3P29320 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.63■□□□□ 0.09
EPHA3P29320 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 AC023908.3-201ENST00000564211 3047 ntBASIC15.63■□□□□ 0.09
EPHA3P29320 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.63■□□□□ 0.09
EPHA3P29320 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
EPHA3P29320 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
EPHA3P29320 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.63■□□□□ 0.09
EPHA3P29320 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
EPHA3P29320 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
EPHA3P29320 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.62■□□□□ 0.09
EPHA3P29320 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
EPHA3P29320 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
EPHA3P29320 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
EPHA3P29320 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
EPHA3P29320 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
EPHA3P29320 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.62■□□□□ 0.09
EPHA3P29320 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
EPHA3P29320 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
EPHA3P29320 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
EPHA3P29320 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
EPHA3P29320 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.62■□□□□ 0.09
EPHA3P29320 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
EPHA3P29320 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.62■□□□□ 0.09
EPHA3P29320 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
EPHA3P29320 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
EPHA3P29320 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
EPHA3P29320 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.62■□□□□ 0.09
EPHA3P29320 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
EPHA3P29320 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
EPHA3P29320 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.62■□□□□ 0.09
EPHA3P29320 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.62■□□□□ 0.09
EPHA3P29320 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.62■□□□□ 0.09
EPHA3P29320 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
EPHA3P29320 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
EPHA3P29320 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.62■□□□□ 0.09
EPHA3P29320 AP001282.1-201ENST00000531301 1499 ntBASIC15.62■□□□□ 0.09
EPHA3P29320 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.62■□□□□ 0.09
EPHA3P29320 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
EPHA3P29320 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
EPHA3P29320 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
EPHA3P29320 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
EPHA3P29320 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.62■□□□□ 0.09
EPHA3P29320 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
EPHA3P29320 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.62■□□□□ 0.09
EPHA3P29320 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
EPHA3P29320 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
EPHA3P29320 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.62■□□□□ 0.09
EPHA3P29320 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
EPHA3P29320 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
EPHA3P29320 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.62■□□□□ 0.09
EPHA3P29320 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
EPHA3P29320 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
EPHA3P29320 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.61■□□□□ 0.09
EPHA3P29320 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
EPHA3P29320 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.61■□□□□ 0.09
EPHA3P29320 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
EPHA3P29320 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms