Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.48■□□□□ 0.07
CAPN3P20807 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN3P20807 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.48■□□□□ 0.07
CAPN3P20807 YBX1P5-201ENST00000509441 847 ntBASIC15.48■□□□□ 0.07
CAPN3P20807 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.48■□□□□ 0.07
CAPN3P20807 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CAPN3P20807 MIR1199-201ENST00000621445 119 ntBASIC15.48■□□□□ 0.07
CAPN3P20807 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.48■□□□□ 0.07
CAPN3P20807 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN3P20807 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN3P20807 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CAPN3P20807 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CAPN3P20807 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN3P20807 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN3P20807 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN3P20807 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN3P20807 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN3P20807 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.48■□□□□ 0.07
CAPN3P20807 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN3P20807 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.48■□□□□ 0.07
CAPN3P20807 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.48■□□□□ 0.07
CAPN3P20807 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.48■□□□□ 0.07
CAPN3P20807 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN3P20807 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CAPN3P20807 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN3P20807 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.48■□□□□ 0.07
CAPN3P20807 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.48■□□□□ 0.07
CAPN3P20807 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CAPN3P20807 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.47■□□□□ 0.07
CAPN3P20807 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.47■□□□□ 0.07
CAPN3P20807 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CAPN3P20807 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.47■□□□□ 0.07
CAPN3P20807 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.47■□□□□ 0.07
CAPN3P20807 AC090616.6-203ENST00000579186 1945 ntBASIC15.47■□□□□ 0.07
CAPN3P20807 AC105250.1-201ENST00000509378 2057 ntBASIC15.47■□□□□ 0.07
CAPN3P20807 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN3P20807 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
CAPN3P20807 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN3P20807 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN3P20807 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN3P20807 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CAPN3P20807 MIR770-201ENST00000390219 98 ntBASIC15.47■□□□□ 0.07
CAPN3P20807 PMS2P4-201ENST00000412466 1052 ntBASIC15.47■□□□□ 0.07
CAPN3P20807 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.47■□□□□ 0.07
CAPN3P20807 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.47■□□□□ 0.07
CAPN3P20807 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.47■□□□□ 0.07
CAPN3P20807 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.47■□□□□ 0.07
CAPN3P20807 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
CAPN3P20807 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.47■□□□□ 0.07
CAPN3P20807 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.47■□□□□ 0.07
CAPN3P20807 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.47■□□□□ 0.07
CAPN3P20807 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN3P20807 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN3P20807 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.47■□□□□ 0.07
CAPN3P20807 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.47■□□□□ 0.07
CAPN3P20807 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.47■□□□□ 0.07
CAPN3P20807 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.47■□□□□ 0.07
CAPN3P20807 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.47■□□□□ 0.07
CAPN3P20807 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.47■□□□□ 0.07
CAPN3P20807 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.47■□□□□ 0.07
CAPN3P20807 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN3P20807 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CAPN3P20807 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.47■□□□□ 0.07
CAPN3P20807 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN3P20807 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN3P20807 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CAPN3P20807 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN3P20807 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CAPN3P20807 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN3P20807 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.47■□□□□ 0.07
CAPN3P20807 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN3P20807 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN3P20807 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN3P20807 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN3P20807 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN3P20807 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN3P20807 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CAPN3P20807 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.46■□□□□ 0.07
CAPN3P20807 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN3P20807 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CAPN3P20807 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CAPN3P20807 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.46■□□□□ 0.07
CAPN3P20807 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN3P20807 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN3P20807 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN3P20807 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN3P20807 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN3P20807 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CAPN3P20807 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CAPN3P20807 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN3P20807 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CAPN3P20807 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.46■□□□□ 0.07
CAPN3P20807 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.46■□□□□ 0.07
CAPN3P20807 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN3P20807 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.46■□□□□ 0.07
CAPN3P20807 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.46■□□□□ 0.07
CAPN3P20807 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN3P20807 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.46■□□□□ 0.07
CAPN3P20807 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN3P20807 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms