Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CPNE3O75131 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.45■□□□□ 0.06
CPNE3O75131 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.45■□□□□ 0.06
CPNE3O75131 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CPNE3O75131 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
CPNE3O75131 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CPNE3O75131 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 RPL37AP1-201ENST00000412502 279 ntBASIC15.45■□□□□ 0.06
CPNE3O75131 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.45■□□□□ 0.06
CPNE3O75131 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.45■□□□□ 0.06
CPNE3O75131 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.45■□□□□ 0.06
CPNE3O75131 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.45■□□□□ 0.06
CPNE3O75131 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.45■□□□□ 0.06
CPNE3O75131 AL079307.3-201ENST00000556114 283 ntBASIC15.45■□□□□ 0.06
CPNE3O75131 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.45■□□□□ 0.06
CPNE3O75131 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
CPNE3O75131 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.45■□□□□ 0.06
CPNE3O75131 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CPNE3O75131 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
CPNE3O75131 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CPNE3O75131 AC026691.1-201ENST00000602502 2017 ntBASIC15.44■□□□□ 0.06
CPNE3O75131 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CPNE3O75131 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.44■□□□□ 0.06
CPNE3O75131 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CPNE3O75131 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
CPNE3O75131 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CPNE3O75131 PCGF3-213ENST00000620529 1899 ntBASIC15.44■□□□□ 0.06
CPNE3O75131 AC007950.2-201ENST00000615045 2347 ntBASIC15.44■□□□□ 0.06
CPNE3O75131 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.44■□□□□ 0.06
CPNE3O75131 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CPNE3O75131 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.44■□□□□ 0.06
CPNE3O75131 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.44■□□□□ 0.06
CPNE3O75131 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.44■□□□□ 0.06
CPNE3O75131 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CPNE3O75131 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.44■□□□□ 0.06
CPNE3O75131 AC009477.1-201ENST00000452936 217 ntBASIC15.44■□□□□ 0.06
CPNE3O75131 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.44■□□□□ 0.06
CPNE3O75131 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.44■□□□□ 0.06
CPNE3O75131 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.44■□□□□ 0.06
CPNE3O75131 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.44■□□□□ 0.06
CPNE3O75131 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.44■□□□□ 0.06
CPNE3O75131 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.44■□□□□ 0.06
CPNE3O75131 AC027307.3-201ENST00000594262 1100 ntBASIC15.44■□□□□ 0.06
CPNE3O75131 AC004233.3-201ENST00000607794 1269 ntBASIC15.44■□□□□ 0.06
CPNE3O75131 AL133215.2-201ENST00000609242 977 ntBASIC15.44■□□□□ 0.06
CPNE3O75131 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
CPNE3O75131 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CPNE3O75131 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CPNE3O75131 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.44■□□□□ 0.06
CPNE3O75131 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CPNE3O75131 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPNE3O75131 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.44■□□□□ 0.06
CPNE3O75131 AL662844.4-201ENST00000606367 2838 ntBASIC15.44■□□□□ 0.06
CPNE3O75131 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
CPNE3O75131 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.43■□□□□ 0.06
CPNE3O75131 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.43■□□□□ 0.06
CPNE3O75131 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPNE3O75131 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CPNE3O75131 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CPNE3O75131 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.43■□□□□ 0.06
CPNE3O75131 LINC02228-204ENST00000642115 2962 ntBASIC15.43■□□□□ 0.06
CPNE3O75131 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms