Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP1S3Q96PC3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.21□□□□□ -0.46
AP1S3Q96PC3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
AP1S3Q96PC3 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
AP1S3Q96PC3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
AP1S3Q96PC3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
AP1S3Q96PC3 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
AP1S3Q96PC3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
AP1S3Q96PC3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
AP1S3Q96PC3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
AP1S3Q96PC3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
AP1S3Q96PC3 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
AP1S3Q96PC3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
AP1S3Q96PC3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
AP1S3Q96PC3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 AC073508.3-201ENST00000619697 1419 ntBASIC12.2□□□□□ -0.46
AP1S3Q96PC3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.2□□□□□ -0.46
AP1S3Q96PC3 GGT3P-204ENST00000453783 1664 ntBASIC12.2□□□□□ -0.46
AP1S3Q96PC3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 OR2I1P-208ENST00000641137 4948 ntBASIC12.2□□□□□ -0.46
AP1S3Q96PC3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 AC006277.1-201ENST00000624348 1610 ntBASIC12.2□□□□□ -0.46
AP1S3Q96PC3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 AC005521.1-201ENST00000393351 872 ntBASIC12.2□□□□□ -0.46
AP1S3Q96PC3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 AL596275.1-201ENST00000423464 877 ntBASIC12.2□□□□□ -0.46
AP1S3Q96PC3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.2□□□□□ -0.46
AP1S3Q96PC3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.2□□□□□ -0.46
AP1S3Q96PC3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 AL596087.1-201ENST00000400979 1969 ntBASIC12.19□□□□□ -0.46
AP1S3Q96PC3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 AC097637.2-201ENST00000624096 1997 ntBASIC12.19□□□□□ -0.46
AP1S3Q96PC3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 AC092053.3-201ENST00000641308 4975 ntBASIC12.19□□□□□ -0.46
AP1S3Q96PC3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 AC026748.1-201ENST00000624349 3251 ntBASIC12.19□□□□□ -0.46
AP1S3Q96PC3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
AP1S3Q96PC3 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms