Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AC079776.1-201ENST00000401540 1152 ntBASIC16.05■□□□□ 0.16
SIPA1Q96FS4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 EEF1DP4-201ENST00000446006 880 ntBASIC16.05■□□□□ 0.16
SIPA1Q96FS4 AC007389.4-201ENST00000454674 793 ntBASIC16.05■□□□□ 0.16
SIPA1Q96FS4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 MIR8072-201ENST00000614241 80 ntBASIC16.05■□□□□ 0.16
SIPA1Q96FS4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 REXO1L8P-201ENST00000604378 1897 ntBASIC16.05■□□□□ 0.16
SIPA1Q96FS4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 CDC14C-201ENST00000428251 1719 ntBASIC16.05■□□□□ 0.16
SIPA1Q96FS4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIPA1Q96FS4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 RN7SL399P-201ENST00000471648 279 ntBASIC16.04■□□□□ 0.16
SIPA1Q96FS4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 MIR6805-201ENST00000615055 62 ntBASIC16.04■□□□□ 0.16
SIPA1Q96FS4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIPA1Q96FS4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 AC092552.1-201ENST00000547243 906 ntBASIC16.03■□□□□ 0.16
SIPA1Q96FS4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 AC036164.1-201ENST00000570544 333 ntBASIC16.03■□□□□ 0.16
SIPA1Q96FS4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 BNIP3P1-202ENST00000550043 1585 ntBASIC16.03■□□□□ 0.16
SIPA1Q96FS4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SIPA1Q96FS4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms