Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 AC004835.2-201ENST00000603762 682 ntBASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
ZNF440Q8IYI8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 AL627223.1-201ENST00000416693 442 ntBASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 UPF3AP3-201ENST00000420996 769 ntBASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 AP000347.1-202ENST00000435868 847 ntBASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 ALG1L8P-201ENST00000533887 760 ntBASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ZNF440Q8IYI8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF440Q8IYI8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF440Q8IYI8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF440Q8IYI8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF440Q8IYI8 CYP4F24P-201ENST00000586049 1580 ntBASIC14.65□□□□□ -0.06
ZNF440Q8IYI8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF440Q8IYI8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.65□□□□□ -0.06
ZNF440Q8IYI8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF440Q8IYI8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
ZNF440Q8IYI8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF440Q8IYI8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF440Q8IYI8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF440Q8IYI8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.65□□□□□ -0.06
ZNF440Q8IYI8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF440Q8IYI8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms