Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.6■□□□□ 0.09
CLCN2P51788 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CLCN2P51788 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN2P51788 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
CLCN2P51788 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.6■□□□□ 0.09
CLCN2P51788 AC134684.3-201ENST00000641758 218 ntBASIC15.6■□□□□ 0.09
CLCN2P51788 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
CLCN2P51788 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.6■□□□□ 0.09
CLCN2P51788 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN2P51788 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN2P51788 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CLCN2P51788 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN2P51788 SSR4P1-203ENST00000599569 2260 ntBASIC15.6■□□□□ 0.09
CLCN2P51788 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.6■□□□□ 0.09
CLCN2P51788 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.6■□□□□ 0.09
CLCN2P51788 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN2P51788 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN2P51788 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN2P51788 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.6■□□□□ 0.09
CLCN2P51788 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN2P51788 AL512652.2-201ENST00000625156 1716 ntBASIC15.6■□□□□ 0.09
CLCN2P51788 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.6■□□□□ 0.09
CLCN2P51788 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CLCN2P51788 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.59■□□□□ 0.09
CLCN2P51788 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
CLCN2P51788 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.59■□□□□ 0.09
CLCN2P51788 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
CLCN2P51788 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.59■□□□□ 0.09
CLCN2P51788 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.59■□□□□ 0.09
CLCN2P51788 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
CLCN2P51788 RPS8P6-201ENST00000426177 609 ntBASIC15.59■□□□□ 0.09
CLCN2P51788 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.59■□□□□ 0.09
CLCN2P51788 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.59■□□□□ 0.09
CLCN2P51788 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.59■□□□□ 0.09
CLCN2P51788 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.59■□□□□ 0.09
CLCN2P51788 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.59■□□□□ 0.09
CLCN2P51788 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
CLCN2P51788 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.59■□□□□ 0.09
CLCN2P51788 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.59■□□□□ 0.09
CLCN2P51788 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.59■□□□□ 0.09
CLCN2P51788 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
CLCN2P51788 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.59■□□□□ 0.09
CLCN2P51788 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.59■□□□□ 0.09
CLCN2P51788 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.59■□□□□ 0.09
CLCN2P51788 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN2P51788 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
CLCN2P51788 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLCN2P51788 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.58■□□□□ 0.09
CLCN2P51788 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLCN2P51788 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLCN2P51788 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLCN2P51788 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLCN2P51788 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLCN2P51788 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLCN2P51788 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLCN2P51788 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLCN2P51788 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
CLCN2P51788 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLCN2P51788 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
CLCN2P51788 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLCN2P51788 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLCN2P51788 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.58■□□□□ 0.08
CLCN2P51788 LINC02447-202ENST00000501888 2146 ntBASIC15.58■□□□□ 0.08
CLCN2P51788 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CLCN2P51788 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN2P51788 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN2P51788 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CLCN2P51788 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN2P51788 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN2P51788 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN2P51788 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.58■□□□□ 0.08
CLCN2P51788 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.58■□□□□ 0.08
CLCN2P51788 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.58■□□□□ 0.08
CLCN2P51788 CYP2A7P1-201ENST00000595391 815 ntBASIC15.58■□□□□ 0.08
CLCN2P51788 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms