Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF253O75346 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ZNF253O75346 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF253O75346 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF253O75346 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF253O75346 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF253O75346 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
ZNF253O75346 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.58□□□□□ -0.4
ZNF253O75346 PMS2P1-201ENST00000431037 1228 ntBASIC12.58□□□□□ -0.4
ZNF253O75346 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.58□□□□□ -0.4
ZNF253O75346 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.58□□□□□ -0.4
ZNF253O75346 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 FAM210CP-201ENST00000445714 574 ntBASIC12.58□□□□□ -0.4
ZNF253O75346 SLC25A6P2-201ENST00000497974 877 ntBASIC12.58□□□□□ -0.4
ZNF253O75346 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC12.58□□□□□ -0.4
ZNF253O75346 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF253O75346 AC107918.2-201ENST00000530817 355 ntBASIC12.58□□□□□ -0.4
ZNF253O75346 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
ZNF253O75346 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF253O75346 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
ZNF253O75346 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
ZNF253O75346 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF253O75346 AL358472.4-201ENST00000633140 710 ntBASIC12.58□□□□□ -0.4
ZNF253O75346 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
ZNF253O75346 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
ZNF253O75346 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ZNF253O75346 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12.58□□□□□ -0.4
ZNF253O75346 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
ZNF253O75346 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ZNF253O75346 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.58□□□□□ -0.4
ZNF253O75346 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ZNF253O75346 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF253O75346 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
ZNF253O75346 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ZNF253O75346 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ZNF253O75346 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF253O75346 FGFR3P6-201ENST00000457012 610 ntBASIC12.57□□□□□ -0.4
ZNF253O75346 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.57□□□□□ -0.4
ZNF253O75346 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
ZNF253O75346 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.57□□□□□ -0.4
ZNF253O75346 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.57□□□□□ -0.4
ZNF253O75346 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.57□□□□□ -0.4
ZNF253O75346 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.57□□□□□ -0.4
ZNF253O75346 AL121772.3-201ENST00000610840 674 ntBASIC12.57□□□□□ -0.4
ZNF253O75346 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
ZNF253O75346 PGM5P2-202ENST00000637225 1043 ntBASIC12.57□□□□□ -0.4
ZNF253O75346 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.57□□□□□ -0.4
ZNF253O75346 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
ZNF253O75346 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.57□□□□□ -0.4
ZNF253O75346 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
ZNF253O75346 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.57□□□□□ -0.4
ZNF253O75346 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.57□□□□□ -0.4
ZNF253O75346 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms