Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TUBB3P1-201ENST00000405796 1332 ntBASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SPDYE7P-202ENST00000420373 878 ntBASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 MIR3197-201ENST00000582241 73 ntBASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 LINC02084-201ENST00000606069 1096 ntBASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TCRBV4S1A1TA0A5B7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TCRBV4S1A1TA0A5B7 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.96□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TCRBV4S1A1TA0A5B7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TCRBV4S1A1TA0A5B7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TCRBV4S1A1TA0A5B7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TCRBV4S1A1TA0A5B7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TCRBV4S1A1TA0A5B7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
TCRBV4S1A1TA0A5B7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.96□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC067930.6-201ENST00000623257 4947 ntBASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 RNA5SP421-201ENST00000516864 134 ntBASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SLC25A39P2-201ENST00000537614 270 ntBASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC069262.1-201ENST00000539058 672 ntBASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC020765.3-201ENST00000613051 740 ntBASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AP005117.1-202ENST00000581724 1908 ntBASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC104640.1-201ENST00000562617 2109 ntBASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.95□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms