Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM6Q9C030 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM6Q9C030 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM6Q9C030 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRIM6Q9C030 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM6Q9C030 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM6Q9C030 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM6Q9C030 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 COX20P2-201ENST00000452636 358 ntBASIC17.68■□□□□ 0.42
TRIM6Q9C030 AL139010.1-201ENST00000454878 894 ntBASIC17.68■□□□□ 0.42
TRIM6Q9C030 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.68■□□□□ 0.42
TRIM6Q9C030 AC009118.2-201ENST00000613275 655 ntBASIC17.68■□□□□ 0.42
TRIM6Q9C030 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM6Q9C030 AC087499.5-201ENST00000452760 1342 ntBASIC17.68■□□□□ 0.42
TRIM6Q9C030 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM6Q9C030 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 AC092171.3-201ENST00000610122 2651 ntBASIC17.67■□□□□ 0.42
TRIM6Q9C030 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRIM6Q9C030 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRIM6Q9C030 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRIM6Q9C030 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRIM6Q9C030 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 AL080243.2-201ENST00000418783 582 ntBASIC17.67■□□□□ 0.42
TRIM6Q9C030 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM6Q9C030 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.67■□□□□ 0.42
TRIM6Q9C030 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM6Q9C030 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM6Q9C030 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
TRIM6Q9C030 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM6Q9C030 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM6Q9C030 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM6Q9C030 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM6Q9C030 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM6Q9C030 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM6Q9C030 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM6Q9C030 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM6Q9C030 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM6Q9C030 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM6Q9C030 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM6Q9C030 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM6Q9C030 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM6Q9C030 AC079328.2-201ENST00000561241 3354 ntBASIC17.66■□□□□ 0.42
TRIM6Q9C030 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms