Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 AC009947.1-201ENST00000444350 727 ntBASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHAMP1Q96JM3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
CHAMP1Q96JM3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.64■□□□□ 0.58
CHAMP1Q96JM3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 GPX1P2-201ENST00000429271 606 ntBASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 VN2R19P-201ENST00000442399 1052 ntBASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 HCG4B-203ENST00000450128 991 ntBASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 UNC93B6-202ENST00000528242 690 ntBASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 AL009183.1-201ENST00000603760 355 ntBASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 AL589702.1-201ENST00000641229 1509 ntBASIC18.64■□□□□ 0.57
CHAMP1Q96JM3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 PMS2P4-201ENST00000412466 1052 ntBASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 RNA5SP419-201ENST00000515908 135 ntBASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 AC104692.2-201ENST00000603054 253 ntBASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CHAMP1Q96JM3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 MRPL3P1-201ENST00000400109 1033 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms