Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 GPAA1P2-202ENST00000606848 1787 ntBASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 AC125604.1-201ENST00000496255 707 ntBASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 NUP210P1-202ENST00000504322 710 ntBASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 GGT4P-201ENST00000623672 1708 ntBASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 DRD5P1-201ENST00000456605 1438 ntBASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 ACKR1-201ENST00000368121 1240 ntBASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 CASP16P-204ENST00000635032 809 ntBASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC168Q8NDH2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 AL354751.1-201ENST00000412768 1863 ntBASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 AC132192.2-201ENST00000596206 1147 ntBASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 AC011491.1-203ENST00000637688 543 ntBASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 AL645728.1-201ENST00000366221 2101 ntBASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 FAM197Y7-201ENST00000432892 766 ntBASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 IMP3P2-201ENST00000489760 475 ntBASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.28□□□□□ -0.28
CCDC168Q8NDH2 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CCDC168Q8NDH2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCDC168Q8NDH2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms