Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.13■□□□□ 0.17
AP1S1P61966 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.13■□□□□ 0.17
AP1S1P61966 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.13■□□□□ 0.17
AP1S1P61966 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.13■□□□□ 0.17
AP1S1P61966 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.13■□□□□ 0.17
AP1S1P61966 AC009477.1-201ENST00000452936 217 ntBASIC16.13■□□□□ 0.17
AP1S1P61966 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.13■□□□□ 0.17
AP1S1P61966 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.13■□□□□ 0.17
AP1S1P61966 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.13■□□□□ 0.17
AP1S1P61966 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.13■□□□□ 0.17
AP1S1P61966 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.13■□□□□ 0.17
AP1S1P61966 AC011467.4-201ENST00000594891 528 ntBASIC16.13■□□□□ 0.17
AP1S1P61966 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
AP1S1P61966 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.13■□□□□ 0.17
AP1S1P61966 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.13■□□□□ 0.17
AP1S1P61966 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
AP1S1P61966 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.13■□□□□ 0.17
AP1S1P61966 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
AP1S1P61966 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.13■□□□□ 0.17
AP1S1P61966 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
AP1S1P61966 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S1P61966 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S1P61966 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.12■□□□□ 0.17
AP1S1P61966 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.12■□□□□ 0.17
AP1S1P61966 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.12■□□□□ 0.17
AP1S1P61966 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
AP1S1P61966 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S1P61966 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S1P61966 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S1P61966 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S1P61966 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S1P61966 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.12■□□□□ 0.17
AP1S1P61966 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S1P61966 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.12■□□□□ 0.17
AP1S1P61966 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.12■□□□□ 0.17
AP1S1P61966 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.12■□□□□ 0.17
AP1S1P61966 INGX-202ENST00000489074 768 ntBASIC16.12■□□□□ 0.17
AP1S1P61966 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.12■□□□□ 0.17
AP1S1P61966 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.12■□□□□ 0.17
AP1S1P61966 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.12■□□□□ 0.17
AP1S1P61966 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.12■□□□□ 0.17
AP1S1P61966 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.12■□□□□ 0.17
AP1S1P61966 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.12■□□□□ 0.17
AP1S1P61966 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.12■□□□□ 0.17
AP1S1P61966 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.12■□□□□ 0.17
AP1S1P61966 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S1P61966 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S1P61966 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S1P61966 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.12■□□□□ 0.17
AP1S1P61966 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S1P61966 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S1P61966 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S1P61966 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S1P61966 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
AP1S1P61966 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S1P61966 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.11■□□□□ 0.17
AP1S1P61966 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.11■□□□□ 0.17
AP1S1P61966 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
AP1S1P61966 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
AP1S1P61966 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
AP1S1P61966 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S1P61966 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.11■□□□□ 0.17
AP1S1P61966 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.11■□□□□ 0.17
AP1S1P61966 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.11■□□□□ 0.17
AP1S1P61966 SDHAP3-202ENST00000515467 728 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms