Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AIF1P55008 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
AIF1P55008 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.51■□□□□ 0.23
AIF1P55008 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AIF1P55008 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AIF1P55008 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
AIF1P55008 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AIF1P55008 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
AIF1P55008 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.51■□□□□ 0.23
AIF1P55008 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AIF1P55008 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
AIF1P55008 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.5■□□□□ 0.23
AIF1P55008 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.5■□□□□ 0.23
AIF1P55008 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.5■□□□□ 0.23
AIF1P55008 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.5■□□□□ 0.23
AIF1P55008 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.5■□□□□ 0.23
AIF1P55008 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.5■□□□□ 0.23
AIF1P55008 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
AIF1P55008 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
AIF1P55008 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
AIF1P55008 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
AIF1P55008 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.5■□□□□ 0.23
AIF1P55008 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.5■□□□□ 0.23
AIF1P55008 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.5■□□□□ 0.23
AIF1P55008 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.5■□□□□ 0.23
AIF1P55008 AC097359.3-201ENST00000603982 1210 ntBASIC16.5■□□□□ 0.23
AIF1P55008 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
AIF1P55008 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.5■□□□□ 0.23
AIF1P55008 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
AIF1P55008 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.5■□□□□ 0.23
AIF1P55008 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
AIF1P55008 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
AIF1P55008 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AIF1P55008 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AIF1P55008 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AIF1P55008 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AIF1P55008 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AIF1P55008 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AIF1P55008 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AIF1P55008 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AIF1P55008 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AIF1P55008 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AIF1P55008 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AIF1P55008 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AIF1P55008 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
AIF1P55008 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AIF1P55008 RPL37AP1-201ENST00000412502 279 ntBASIC16.49■□□□□ 0.23
AIF1P55008 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.49■□□□□ 0.23
AIF1P55008 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AIF1P55008 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.49■□□□□ 0.23
AIF1P55008 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AIF1P55008 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
AIF1P55008 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.49■□□□□ 0.23
AIF1P55008 MIR4313-201ENST00000580760 101 ntBASIC16.49■□□□□ 0.23
AIF1P55008 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.49■□□□□ 0.23
AIF1P55008 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.49■□□□□ 0.23
AIF1P55008 SPDYE12P-201ENST00000618416 771 ntBASIC16.49■□□□□ 0.23
AIF1P55008 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AIF1P55008 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.49■□□□□ 0.23
AIF1P55008 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AIF1P55008 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
AIF1P55008 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.49■□□□□ 0.23
AIF1P55008 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.49■□□□□ 0.23
AIF1P55008 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AIF1P55008 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
AIF1P55008 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
AIF1P55008 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
AIF1P55008 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
AIF1P55008 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
AIF1P55008 AC011270.2-201ENST00000624293 2550 ntBASIC16.48■□□□□ 0.23
AIF1P55008 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AIF1P55008 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
AIF1P55008 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AIF1P55008 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.48■□□□□ 0.23
AIF1P55008 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AIF1P55008 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
AIF1P55008 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.48■□□□□ 0.23
AIF1P55008 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AIF1P55008 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AIF1P55008 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms