Protein–RNA interactions for Protein: P28562

DUSP1, Dual specificity protein phosphatase 1, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP1P28562 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUSP1P28562 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
DUSP1P28562 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.79□□□□□ -0.2
DUSP1P28562 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUSP1P28562 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DUSP1P28562 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
DUSP1P28562 MIR940-201ENST00000401276 94 ntBASIC13.79□□□□□ -0.2
DUSP1P28562 AC026396.1-201ENST00000419388 421 ntBASIC13.79□□□□□ -0.2
DUSP1P28562 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.79□□□□□ -0.2
DUSP1P28562 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.79□□□□□ -0.2
DUSP1P28562 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DUSP1P28562 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.79□□□□□ -0.2
DUSP1P28562 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
DUSP1P28562 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
DUSP1P28562 AC140113.2-201ENST00000604370 208 ntBASIC13.79□□□□□ -0.2
DUSP1P28562 BX640515.1-201ENST00000617215 977 ntBASIC13.79□□□□□ -0.2
DUSP1P28562 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUSP1P28562 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUSP1P28562 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUSP1P28562 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
DUSP1P28562 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DUSP1P28562 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.79□□□□□ -0.2
DUSP1P28562 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.79□□□□□ -0.2
DUSP1P28562 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
DUSP1P28562 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUSP1P28562 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUSP1P28562 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.79□□□□□ -0.2
DUSP1P28562 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUSP1P28562 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.79□□□□□ -0.2
DUSP1P28562 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.79□□□□□ -0.2
DUSP1P28562 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUSP1P28562 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUSP1P28562 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.79□□□□□ -0.2
DUSP1P28562 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUSP1P28562 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
DUSP1P28562 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.78□□□□□ -0.2
DUSP1P28562 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.78□□□□□ -0.2
DUSP1P28562 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.78□□□□□ -0.2
DUSP1P28562 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.78□□□□□ -0.2
DUSP1P28562 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.78□□□□□ -0.2
DUSP1P28562 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.78□□□□□ -0.2
DUSP1P28562 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
DUSP1P28562 MED15P5-201ENST00000423150 992 ntBASIC13.78□□□□□ -0.2
DUSP1P28562 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.78□□□□□ -0.2
DUSP1P28562 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.78□□□□□ -0.2
DUSP1P28562 AC093724.1-201ENST00000448659 1027 ntBASIC13.78□□□□□ -0.2
DUSP1P28562 AC074386.1-202ENST00000463561 864 ntBASIC13.78□□□□□ -0.2
DUSP1P28562 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.78□□□□□ -0.2
DUSP1P28562 RNA5SP416-201ENST00000516838 111 ntBASIC13.78□□□□□ -0.2
DUSP1P28562 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
DUSP1P28562 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.78□□□□□ -0.2
DUSP1P28562 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
DUSP1P28562 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.78□□□□□ -0.2
DUSP1P28562 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
DUSP1P28562 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.78□□□□□ -0.2
DUSP1P28562 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.78□□□□□ -0.2
DUSP1P28562 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
DUSP1P28562 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.78□□□□□ -0.2
DUSP1P28562 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
DUSP1P28562 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.78□□□□□ -0.2
DUSP1P28562 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.78□□□□□ -0.2
DUSP1P28562 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.78□□□□□ -0.2
DUSP1P28562 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.78□□□□□ -0.2
DUSP1P28562 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.78□□□□□ -0.2
DUSP1P28562 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.78□□□□□ -0.2
DUSP1P28562 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.78□□□□□ -0.2
DUSP1P28562 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
DUSP1P28562 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 AC112504.1-201ENST00000623415 1841 ntBASIC13.78□□□□□ -0.2
DUSP1P28562 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
DUSP1P28562 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.78□□□□□ -0.2
DUSP1P28562 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUSP1P28562 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms