Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH3P22223 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH3P22223 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.83■□□□□ 0.12
CDH3P22223 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH3P22223 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH3P22223 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH3P22223 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.83■□□□□ 0.12
CDH3P22223 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH3P22223 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH3P22223 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH3P22223 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH3P22223 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH3P22223 AC078925.2-201ENST00000624013 1973 ntBASIC15.83■□□□□ 0.12
CDH3P22223 TUBB3P1-201ENST00000405796 1332 ntBASIC15.83■□□□□ 0.12
CDH3P22223 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH3P22223 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH3P22223 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH3P22223 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH3P22223 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH3P22223 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CDH3P22223 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH3P22223 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CDH3P22223 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH3P22223 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH3P22223 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH3P22223 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH3P22223 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH3P22223 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH3P22223 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH3P22223 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH3P22223 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CDH3P22223 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH3P22223 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH3P22223 AC068587.6-202ENST00000641839 5619 ntBASIC15.82■□□□□ 0.12
CDH3P22223 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH3P22223 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDH3P22223 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH3P22223 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH3P22223 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CDH3P22223 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH3P22223 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDH3P22223 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH3P22223 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH3P22223 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDH3P22223 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH3P22223 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH3P22223 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH3P22223 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH3P22223 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH3P22223 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH3P22223 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH3P22223 HMGN1P19-201ENST00000436976 333 ntBASIC15.82■□□□□ 0.12
CDH3P22223 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH3P22223 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.82■□□□□ 0.12
CDH3P22223 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CDH3P22223 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH3P22223 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH3P22223 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH3P22223 AC015911.4-201ENST00000588022 1070 ntBASIC15.82■□□□□ 0.12
CDH3P22223 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH3P22223 SPTSSB-204ENST00000617024 1292 ntBASIC15.82■□□□□ 0.12
CDH3P22223 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH3P22223 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH3P22223 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH3P22223 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH3P22223 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH3P22223 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CDH3P22223 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH3P22223 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH3P22223 AC008677.1-201ENST00000519230 1561 ntBASIC15.82■□□□□ 0.12
CDH3P22223 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH3P22223 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH3P22223 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH3P22223 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH3P22223 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH3P22223 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH3P22223 GGT4P-201ENST00000623672 1708 ntBASIC15.82■□□□□ 0.12
CDH3P22223 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH3P22223 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH3P22223 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH3P22223 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH3P22223 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH3P22223 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.81■□□□□ 0.12
CDH3P22223 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH3P22223 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH3P22223 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH3P22223 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH3P22223 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH3P22223 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH3P22223 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CDH3P22223 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH3P22223 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH3P22223 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH3P22223 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH3P22223 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH3P22223 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH3P22223 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.81■□□□□ 0.12
CDH3P22223 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CDH3P22223 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH3P22223 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms