Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
IFNA1P01562 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
IFNA1P01562 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.78□□□□□ -0.36
IFNA1P01562 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
IFNA1P01562 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
IFNA1P01562 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
IFNA1P01562 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.78□□□□□ -0.36
IFNA1P01562 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.78□□□□□ -0.36
IFNA1P01562 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
IFNA1P01562 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
IFNA1P01562 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
IFNA1P01562 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.77□□□□□ -0.36
IFNA1P01562 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
IFNA1P01562 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.77□□□□□ -0.36
IFNA1P01562 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
IFNA1P01562 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
IFNA1P01562 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
IFNA1P01562 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
IFNA1P01562 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.77□□□□□ -0.36
IFNA1P01562 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
IFNA1P01562 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
IFNA1P01562 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.77□□□□□ -0.37
IFNA1P01562 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.77□□□□□ -0.37
IFNA1P01562 AC233702.5-201ENST00000584107 538 ntBASIC12.77□□□□□ -0.37
IFNA1P01562 AD001527.2-201ENST00000622994 785 ntBASIC12.77□□□□□ -0.37
IFNA1P01562 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC12.77□□□□□ -0.37
IFNA1P01562 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.77□□□□□ -0.37
IFNA1P01562 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.77□□□□□ -0.37
IFNA1P01562 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
IFNA1P01562 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
IFNA1P01562 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 AC008677.1-201ENST00000519230 1561 ntBASIC12.77□□□□□ -0.37
IFNA1P01562 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
IFNA1P01562 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IFNA1P01562 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.77□□□□□ -0.37
IFNA1P01562 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.77□□□□□ -0.37
IFNA1P01562 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.77□□□□□ -0.37
IFNA1P01562 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
IFNA1P01562 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
IFNA1P01562 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
IFNA1P01562 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
IFNA1P01562 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
IFNA1P01562 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.76□□□□□ -0.37
IFNA1P01562 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.76□□□□□ -0.37
IFNA1P01562 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
IFNA1P01562 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.76□□□□□ -0.37
IFNA1P01562 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.76□□□□□ -0.37
IFNA1P01562 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 INGX-201ENST00000359239 846 ntBASIC12.76□□□□□ -0.37
IFNA1P01562 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.76□□□□□ -0.37
IFNA1P01562 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC12.76□□□□□ -0.37
IFNA1P01562 GUSBP12-201ENST00000513727 720 ntBASIC12.76□□□□□ -0.37
IFNA1P01562 DENND3-207ENST00000518347 850 ntTSL 2 BASIC12.76□□□□□ -0.37
IFNA1P01562 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC12.76□□□□□ -0.37
IFNA1P01562 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC12.76□□□□□ -0.37
IFNA1P01562 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.76□□□□□ -0.37
IFNA1P01562 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC12.76□□□□□ -0.37
IFNA1P01562 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.76□□□□□ -0.37
IFNA1P01562 EMC9-206ENST00000560403 872 ntTSL 2 BASIC12.76□□□□□ -0.37
IFNA1P01562 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.76□□□□□ -0.37
IFNA1P01562 AL390719.2-201ENST00000606993 987 ntBASIC12.76□□□□□ -0.37
IFNA1P01562 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
IFNA1P01562 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
IFNA1P01562 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IFNA1P01562 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
IFNA1P01562 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
IFNA1P01562 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms