Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CBX6O95503 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CBX6O95503 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX6O95503 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.11■□□□□ 0.17
CBX6O95503 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX6O95503 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.11■□□□□ 0.17
CBX6O95503 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CBX6O95503 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CBX6O95503 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CBX6O95503 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CBX6O95503 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX6O95503 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX6O95503 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX6O95503 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX6O95503 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX6O95503 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CBX6O95503 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX6O95503 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX6O95503 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX6O95503 PCGF3-213ENST00000620529 1899 ntBASIC16.1■□□□□ 0.17
CBX6O95503 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
CBX6O95503 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CBX6O95503 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.1■□□□□ 0.17
CBX6O95503 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CBX6O95503 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX6O95503 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CBX6O95503 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CBX6O95503 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CBX6O95503 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.1■□□□□ 0.17
CBX6O95503 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX6O95503 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.1■□□□□ 0.17
CBX6O95503 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CBX6O95503 AC211486.1-202ENST00000416371 468 ntBASIC16.1■□□□□ 0.17
CBX6O95503 LAGE3P1-201ENST00000425356 484 ntBASIC16.1■□□□□ 0.17
CBX6O95503 POU5F1P6-201ENST00000466990 990 ntBASIC16.1■□□□□ 0.17
CBX6O95503 AC211476.1-201ENST00000503899 468 ntBASIC16.1■□□□□ 0.17
CBX6O95503 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.1■□□□□ 0.17
CBX6O95503 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.1■□□□□ 0.17
CBX6O95503 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.1■□□□□ 0.17
CBX6O95503 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.1■□□□□ 0.17
CBX6O95503 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.1■□□□□ 0.17
CBX6O95503 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.1■□□□□ 0.17
CBX6O95503 AP000867.4-201ENST00000641616 219 ntBASIC16.1■□□□□ 0.17
CBX6O95503 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CBX6O95503 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.1■□□□□ 0.17
CBX6O95503 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX6O95503 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX6O95503 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX6O95503 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CBX6O95503 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.1■□□□□ 0.17
CBX6O95503 TMBIM7P-203ENST00000641617 1718 ntBASIC16.1■□□□□ 0.17
CBX6O95503 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX6O95503 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX6O95503 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CBX6O95503 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX6O95503 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX6O95503 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CBX6O95503 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX6O95503 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX6O95503 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX6O95503 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CBX6O95503 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CBX6O95503 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.09■□□□□ 0.17
CBX6O95503 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX6O95503 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.09■□□□□ 0.17
CBX6O95503 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.09■□□□□ 0.17
CBX6O95503 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX6O95503 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX6O95503 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX6O95503 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX6O95503 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.09■□□□□ 0.17
CBX6O95503 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX6O95503 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
CBX6O95503 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX6O95503 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX6O95503 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CBX6O95503 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX6O95503 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.09■□□□□ 0.17
CBX6O95503 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.09■□□□□ 0.17
CBX6O95503 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX6O95503 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.09■□□□□ 0.17
CBX6O95503 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.09■□□□□ 0.17
CBX6O95503 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.09■□□□□ 0.17
CBX6O95503 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.09■□□□□ 0.17
CBX6O95503 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX6O95503 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.09■□□□□ 0.17
CBX6O95503 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.09■□□□□ 0.17
CBX6O95503 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.09■□□□□ 0.17
CBX6O95503 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX6O95503 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX6O95503 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX6O95503 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.09■□□□□ 0.17
CBX6O95503 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.09■□□□□ 0.17
CBX6O95503 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX6O95503 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.09■□□□□ 0.17
CBX6O95503 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.09■□□□□ 0.17
CBX6O95503 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX6O95503 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX6O95503 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX6O95503 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms