Protein–RNA interactions for Protein: O14745

SLC9A3R1, Na(+)/H(+) exchange regulatory cofactor NHE-RF1, humanhuman

Predicted RBP Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1O14745 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SLC9A3R1O14745 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3R1O14745 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3R1O14745 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC9A3R1O14745 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
SLC9A3R1O14745 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.39■□□□□ 0.22
SLC9A3R1O14745 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SLC9A3R1O14745 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
SLC9A3R1O14745 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SLC9A3R1O14745 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SLC9A3R1O14745 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 ALOX12P2-203ENST00000570921 1945 ntBASIC16.39■□□□□ 0.21
SLC9A3R1O14745 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 AC098850.1-201ENST00000419919 790 ntBASIC16.39■□□□□ 0.21
SLC9A3R1O14745 ARSEP1-201ENST00000420443 635 ntBASIC16.39■□□□□ 0.21
SLC9A3R1O14745 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 AC007389.4-201ENST00000454674 793 ntBASIC16.39■□□□□ 0.21
SLC9A3R1O14745 RN7SL837P-201ENST00000463010 287 ntBASIC16.39■□□□□ 0.21
SLC9A3R1O14745 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 AL450472.2-201ENST00000603663 1156 ntBASIC16.39■□□□□ 0.21
SLC9A3R1O14745 MIR6752-201ENST00000618442 71 ntBASIC16.39■□□□□ 0.21
SLC9A3R1O14745 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3R1O14745 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 IGHV3-71-201ENST00000523324 359 ntBASIC16.38■□□□□ 0.21
SLC9A3R1O14745 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 WFDC1-204ENST00000613603 549 ntBASIC16.38■□□□□ 0.21
SLC9A3R1O14745 AL033527.5-201ENST00000641382 801 ntBASIC16.38■□□□□ 0.21
SLC9A3R1O14745 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3R1O14745 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC9A3R1O14745 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC9A3R1O14745 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC9A3R1O14745 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SLC9A3R1O14745 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC9A3R1O14745 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms