Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBQLN2Q9UHD9 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBQLN2Q9UHD9 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.68□□□□□ -0.22
UBQLN2Q9UHD9 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBQLN2Q9UHD9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 AL645929.1-201ENST00000420084 975 ntBASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 PVRIG2P-201ENST00000435460 978 ntBASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 AL121956.5-201ENST00000625261 221 ntBASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 GPR89P-201ENST00000407924 1495 ntBASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.67□□□□□ -0.22
UBQLN2Q9UHD9 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 MROH4P-201ENST00000431302 1578 ntBASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 AC005332.1-201ENST00000577698 1310 ntBASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 GGT3P-204ENST00000453783 1664 ntBASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 CICP17-201ENST00000418553 2377 ntBASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 CICP8-201ENST00000455800 2813 ntBASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 FAM86EP-206ENST00000510506 987 ntBASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 IER3-202ENST00000376377 1350 ntBASIC13.66□□□□□ -0.22
UBQLN2Q9UHD9 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms