Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 PCDH8P1-201ENST00000428983 2773 ntBASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 FAM86LP-201ENST00000478302 853 ntBASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 AC119751.2-201ENST00000504529 210 ntBASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 SNX29P1-201ENST00000548357 1007 ntBASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 AC097359.3-201ENST00000603982 1210 ntBASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 PCDHA14-201ENST00000506751 2298 ntBASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FBXO28Q9NVF7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 AC136604.1-201ENST00000418535 575 ntBASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 AL450472.2-201ENST00000603663 1156 ntBASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 AL607033.1-201ENST00000623900 1599 ntBASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.34■□□□□ 0.53
FBXO28Q9NVF7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.33■□□□□ 0.53
FBXO28Q9NVF7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
FBXO28Q9NVF7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FBXO28Q9NVF7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
FBXO28Q9NVF7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FBXO28Q9NVF7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
FBXO28Q9NVF7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
FBXO28Q9NVF7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FBXO28Q9NVF7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.33■□□□□ 0.53
FBXO28Q9NVF7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FBXO28Q9NVF7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
FBXO28Q9NVF7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
FBXO28Q9NVF7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 TOMM22P5-201ENST00000416399 439 ntBASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 AL359711.2-201ENST00000563105 872 ntBASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 MIR6805-201ENST00000615055 62 ntBASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.33■□□□□ 0.52
FBXO28Q9NVF7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms