Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP4Q6PIL6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
KCNIP4Q6PIL6 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP4Q6PIL6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP4Q6PIL6 LINC01144-201ENST00000626198 1710 ntBASIC12.54□□□□□ -0.4
KCNIP4Q6PIL6 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP4Q6PIL6 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 CYP2D8P-201ENST00000433633 1490 ntBASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 BEND3P1-201ENST00000421591 1944 ntBASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 AL596275.1-201ENST00000423464 877 ntBASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 AC041040.2-201ENST00000622926 2899 ntBASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
KCNIP4Q6PIL6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP4Q6PIL6 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP4Q6PIL6 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.52□□□□□ -0.4
KCNIP4Q6PIL6 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.52□□□□□ -0.4
KCNIP4Q6PIL6 AC117489.1-201ENST00000625169 3217 ntBASIC12.52□□□□□ -0.4
KCNIP4Q6PIL6 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP4Q6PIL6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP4Q6PIL6 AC010460.3-201ENST00000511359 1579 ntBASIC12.52□□□□□ -0.4
KCNIP4Q6PIL6 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP4Q6PIL6 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP4Q6PIL6 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP4Q6PIL6 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP4Q6PIL6 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.52□□□□□ -0.4
KCNIP4Q6PIL6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP4Q6PIL6 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP4Q6PIL6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP4Q6PIL6 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
KCNIP4Q6PIL6 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
KCNIP4Q6PIL6 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 FAM8A6P-201ENST00000407496 1135 ntBASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 AL137013.1-201ENST00000432946 1228 ntBASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 AC145285.6-201ENST00000604632 637 ntBASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
KCNIP4Q6PIL6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms