Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01556Q5JQF7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01556Q5JQF7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01556Q5JQF7 AC069224.1-201ENST00000566372 1715 ntBASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 HLA-DRB6-201ENST00000411500 1235 ntBASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 EEF1DP4-201ENST00000446006 880 ntBASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 RFPL4AP1-201ENST00000530883 850 ntBASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 AL079307.3-201ENST00000556114 283 ntBASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 MIR600HG-201ENST00000449175 5984 ntBASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 AL136982.4-201ENST00000437689 1740 ntBASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 KRT8P37-201ENST00000451609 1420 ntBASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01556Q5JQF7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 KRT8P12-202ENST00000472924 1397 ntBASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 FO393414.2-201ENST00000405153 598 ntBASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 AC106028.4-201ENST00000614509 607 ntBASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01556Q5JQF7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms