Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 AP001350.2-201ENST00000625104 1094 ntBASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 LINC00552-201ENST00000625151 2579 ntBASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 C18orf15-201ENST00000623680 2534 ntBASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ANKRD55Q3KP44 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 KRT16P4-201ENST00000453883 522 ntBASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 AC107918.2-201ENST00000530817 355 ntBASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 CLEC4GP1-201ENST00000596555 870 ntBASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 AC099336.1-202ENST00000602961 463 ntBASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 CICP4-201ENST00000447359 2812 ntBASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ANKRD55Q3KP44 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ANKRD55Q3KP44 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms