Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.73□□□□□ -0.05
LTBQ06643 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LTBQ06643 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LTBQ06643 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LTBQ06643 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.73□□□□□ -0.05
LTBQ06643 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LTBQ06643 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LTBQ06643 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LTBQ06643 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LTBQ06643 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.72□□□□□ -0.05
LTBQ06643 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LTBQ06643 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LTBQ06643 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBQ06643 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBQ06643 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBQ06643 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.72□□□□□ -0.05
LTBQ06643 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBQ06643 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.72□□□□□ -0.05
LTBQ06643 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.72□□□□□ -0.05
LTBQ06643 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LTBQ06643 AL139400.1-201ENST00000366220 510 ntBASIC14.72□□□□□ -0.05
LTBQ06643 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBQ06643 MIR648-201ENST00000385046 94 ntBASIC14.72□□□□□ -0.05
LTBQ06643 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.72□□□□□ -0.05
LTBQ06643 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LTBQ06643 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.72□□□□□ -0.05
LTBQ06643 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.72□□□□□ -0.05
LTBQ06643 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.72□□□□□ -0.05
LTBQ06643 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LTBQ06643 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LTBQ06643 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.72□□□□□ -0.05
LTBQ06643 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.72□□□□□ -0.05
LTBQ06643 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.72□□□□□ -0.05
LTBQ06643 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.72□□□□□ -0.05
LTBQ06643 AC012645.4-201ENST00000610691 1061 ntBASIC14.72□□□□□ -0.05
LTBQ06643 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.72□□□□□ -0.05
LTBQ06643 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
LTBQ06643 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LTBQ06643 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LTBQ06643 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.72□□□□□ -0.05
LTBQ06643 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LTBQ06643 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBQ06643 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.72□□□□□ -0.05
LTBQ06643 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LTBQ06643 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBQ06643 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBQ06643 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LTBQ06643 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LTBQ06643 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.72□□□□□ -0.05
LTBQ06643 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBQ06643 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.72□□□□□ -0.05
LTBQ06643 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LTBQ06643 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LTBQ06643 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LTBQ06643 AL589702.1-201ENST00000641229 1509 ntBASIC14.71□□□□□ -0.05
LTBQ06643 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LTBQ06643 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LTBQ06643 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
LTBQ06643 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LTBQ06643 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
LTBQ06643 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
LTBQ06643 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
LTBQ06643 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
LTBQ06643 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.71□□□□□ -0.05
LTBQ06643 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LTBQ06643 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LTBQ06643 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
LTBQ06643 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.71□□□□□ -0.05
LTBQ06643 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LTBQ06643 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LTBQ06643 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LTBQ06643 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LTBQ06643 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.71□□□□□ -0.05
LTBQ06643 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.71□□□□□ -0.05
LTBQ06643 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LTBQ06643 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.71□□□□□ -0.05
LTBQ06643 AC112191.1-201ENST00000523689 701 ntBASIC14.71□□□□□ -0.05
LTBQ06643 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.71□□□□□ -0.05
LTBQ06643 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.71□□□□□ -0.05
LTBQ06643 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.71□□□□□ -0.05
LTBQ06643 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.71□□□□□ -0.05
LTBQ06643 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.71□□□□□ -0.05
LTBQ06643 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LTBQ06643 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.71□□□□□ -0.05
LTBQ06643 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LTBQ06643 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LTBQ06643 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LTBQ06643 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.71□□□□□ -0.05
LTBQ06643 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LTBQ06643 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LTBQ06643 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.71□□□□□ -0.06
LTBQ06643 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LTBQ06643 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LTBQ06643 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
LTBQ06643 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
LTBQ06643 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LTBQ06643 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LTBQ06643 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
LTBQ06643 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LTBQ06643 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms