Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A3P43003 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC1A3P43003 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A3P43003 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A3P43003 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A3P43003 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.84□□□□□ -0.03
SLC1A3P43003 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC1A3P43003 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.84□□□□□ -0.03
SLC1A3P43003 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A3P43003 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.84□□□□□ -0.03
SLC1A3P43003 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A3P43003 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC1A3P43003 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.84□□□□□ -0.03
SLC1A3P43003 MKNK2P1-201ENST00000437526 628 ntBASIC14.84□□□□□ -0.03
SLC1A3P43003 AC105233.2-201ENST00000523697 349 ntBASIC14.84□□□□□ -0.03
SLC1A3P43003 AF228730.5-201ENST00000530288 346 ntBASIC14.84□□□□□ -0.03
SLC1A3P43003 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC1A3P43003 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.84□□□□□ -0.03
SLC1A3P43003 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
SLC1A3P43003 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.84□□□□□ -0.03
SLC1A3P43003 AC073389.1-201ENST00000595595 795 ntBASIC14.84□□□□□ -0.03
SLC1A3P43003 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC1A3P43003 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC1A3P43003 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A3P43003 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SLC1A3P43003 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC1A3P43003 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC1A3P43003 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
SLC1A3P43003 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A3P43003 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
SLC1A3P43003 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A3P43003 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC1A3P43003 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SLC1A3P43003 PRAL-201ENST00000624952 3286 ntBASIC14.83□□□□□ -0.03
SLC1A3P43003 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC1A3P43003 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SLC1A3P43003 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SLC1A3P43003 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC1A3P43003 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
SLC1A3P43003 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SLC1A3P43003 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC1A3P43003 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC1A3P43003 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.83□□□□□ -0.04
SLC1A3P43003 AL138918.1-201ENST00000568306 659 ntBASIC14.83□□□□□ -0.04
SLC1A3P43003 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC1A3P43003 AC008267.7-201ENST00000624570 1194 ntBASIC14.83□□□□□ -0.04
SLC1A3P43003 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC1A3P43003 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SLC1A3P43003 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SLC1A3P43003 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC1A3P43003 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC1A3P43003 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
SLC1A3P43003 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC1A3P43003 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A3P43003 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SLC1A3P43003 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC1A3P43003 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A3P43003 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A3P43003 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SLC1A3P43003 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A3P43003 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC1A3P43003 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A3P43003 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A3P43003 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A3P43003 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A3P43003 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A3P43003 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC1A3P43003 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A3P43003 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SLC1A3P43003 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC1A3P43003 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SLC1A3P43003 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC1A3P43003 HTR5BP-201ENST00000430851 1154 ntBASIC14.82□□□□□ -0.04
SLC1A3P43003 ADH5P3-201ENST00000433842 1137 ntBASIC14.82□□□□□ -0.04
SLC1A3P43003 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SLC1A3P43003 AC245100.5-201ENST00000452108 331 ntBASIC14.82□□□□□ -0.04
SLC1A3P43003 AC098859.1-201ENST00000502915 1238 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms