Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TPM3P06753 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TPM3P06753 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TPM3P06753 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.12■□□□□ 0.49
TPM3P06753 AC004706.3-202ENST00000621574 984 ntBASIC18.12■□□□□ 0.49
TPM3P06753 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TPM3P06753 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.12■□□□□ 0.49
TPM3P06753 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
TPM3P06753 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.12■□□□□ 0.49
TPM3P06753 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TPM3P06753 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TPM3P06753 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TPM3P06753 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TPM3P06753 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TPM3P06753 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.11■□□□□ 0.49
TPM3P06753 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TPM3P06753 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TPM3P06753 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TPM3P06753 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TPM3P06753 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TPM3P06753 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 AC007191.1-201ENST00000623179 2995 ntBASIC18.11■□□□□ 0.49
TPM3P06753 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TPM3P06753 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.11■□□□□ 0.49
TPM3P06753 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.11■□□□□ 0.49
TPM3P06753 AL805961.1-202ENST00000641562 540 ntBASIC18.11■□□□□ 0.49
TPM3P06753 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.11■□□□□ 0.49
TPM3P06753 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 U82695.1-201ENST00000635752 1889 ntBASIC18.11■□□□□ 0.49
TPM3P06753 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.11■□□□□ 0.49
TPM3P06753 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TPM3P06753 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.11■□□□□ 0.49
TPM3P06753 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TPM3P06753 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPM3P06753 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC18.1■□□□□ 0.49
TPM3P06753 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.1■□□□□ 0.49
TPM3P06753 AC005622.1-201ENST00000636801 1703 ntBASIC18.1■□□□□ 0.49
TPM3P06753 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
TPM3P06753 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.1■□□□□ 0.49
TPM3P06753 AC129492.6-201ENST00000611383 1305 ntBASIC18.1■□□□□ 0.49
TPM3P06753 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TPM3P06753 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.1■□□□□ 0.49
TPM3P06753 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 SLC25A6P2-201ENST00000497974 877 ntBASIC18.1■□□□□ 0.49
TPM3P06753 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.1■□□□□ 0.49
TPM3P06753 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.1■□□□□ 0.49
TPM3P06753 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.1■□□□□ 0.49
TPM3P06753 AC138894.3-201ENST00000603787 634 ntBASIC18.1■□□□□ 0.49
TPM3P06753 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TPM3P06753 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 AC013726.1-201ENST00000563747 2285 ntBASIC18.1■□□□□ 0.49
TPM3P06753 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TPM3P06753 AL390755.1-201ENST00000623716 2027 ntBASIC18.1■□□□□ 0.49
TPM3P06753 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM3P06753 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.09■□□□□ 0.49
TPM3P06753 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TPM3P06753 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.09■□□□□ 0.49
TPM3P06753 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.09■□□□□ 0.49
TPM3P06753 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM3P06753 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.09■□□□□ 0.49
TPM3P06753 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TPM3P06753 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TPM3P06753 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.09■□□□□ 0.49
TPM3P06753 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms