Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 HTR5BP-201ENST00000430851 1154 ntBASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 MIR3687-2-201ENST00000577708 61 ntBASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 MIR3687-1-201ENST00000614492 61 ntBASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAPPC4Q9Y296 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 AL355306.1-201ENST00000415580 579 ntBASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAPPC4Q9Y296 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms