Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 SPTSSB-204ENST00000617024 1292 ntBASIC18.71■□□□□ 0.59
PGBD1Q96JS3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PGBD1Q96JS3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 PPT1-215ENST00000641471 2368 ntBASIC18.7■□□□□ 0.58
PGBD1Q96JS3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PGBD1Q96JS3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 AC022532.1-201ENST00000624563 1728 ntBASIC18.69■□□□□ 0.58
PGBD1Q96JS3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 RARRES2P9-201ENST00000565168 469 ntBASIC18.69■□□□□ 0.58
PGBD1Q96JS3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 MIR6080-201ENST00000617359 66 ntBASIC18.69■□□□□ 0.58
PGBD1Q96JS3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PGBD1Q96JS3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms