Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.69□□□□□ -0.22
VAMP1P23763 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VAMP1P23763 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.69□□□□□ -0.22
VAMP1P23763 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VAMP1P23763 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.69□□□□□ -0.22
VAMP1P23763 MPDU1-223ENST00000582151 728 ntBASIC13.69□□□□□ -0.22
VAMP1P23763 AC010654.1-201ENST00000615722 808 ntBASIC13.69□□□□□ -0.22
VAMP1P23763 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
VAMP1P23763 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VAMP1P23763 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
VAMP1P23763 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
VAMP1P23763 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VAMP1P23763 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.69□□□□□ -0.22
VAMP1P23763 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
VAMP1P23763 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VAMP1P23763 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
VAMP1P23763 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
VAMP1P23763 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
VAMP1P23763 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VAMP1P23763 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VAMP1P23763 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VAMP1P23763 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.69□□□□□ -0.22
VAMP1P23763 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VAMP1P23763 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VAMP1P23763 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
VAMP1P23763 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VAMP1P23763 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VAMP1P23763 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VAMP1P23763 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VAMP1P23763 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VAMP1P23763 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
VAMP1P23763 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.68□□□□□ -0.22
VAMP1P23763 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.68□□□□□ -0.22
VAMP1P23763 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.68□□□□□ -0.22
VAMP1P23763 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.68□□□□□ -0.22
VAMP1P23763 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.68□□□□□ -0.22
VAMP1P23763 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
VAMP1P23763 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
VAMP1P23763 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.68□□□□□ -0.22
VAMP1P23763 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.68□□□□□ -0.22
VAMP1P23763 SPDYE21P-201ENST00000413323 827 ntBASIC13.68□□□□□ -0.22
VAMP1P23763 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.68□□□□□ -0.22
VAMP1P23763 AC246785.2-201ENST00000432512 513 ntBASIC13.68□□□□□ -0.22
VAMP1P23763 BX664615.1-201ENST00000443558 458 ntBASIC13.68□□□□□ -0.22
VAMP1P23763 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.68□□□□□ -0.22
VAMP1P23763 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.68□□□□□ -0.22
VAMP1P23763 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.68□□□□□ -0.22
VAMP1P23763 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.68□□□□□ -0.22
VAMP1P23763 NIFKP4-201ENST00000567275 1192 ntBASIC13.68□□□□□ -0.22
VAMP1P23763 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.68□□□□□ -0.22
VAMP1P23763 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
VAMP1P23763 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.68□□□□□ -0.22
VAMP1P23763 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
VAMP1P23763 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.68□□□□□ -0.22
VAMP1P23763 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
VAMP1P23763 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
VAMP1P23763 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.68□□□□□ -0.22
VAMP1P23763 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
VAMP1P23763 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.68□□□□□ -0.22
VAMP1P23763 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
VAMP1P23763 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
VAMP1P23763 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.68□□□□□ -0.22
VAMP1P23763 TP73-AS1-210ENST00000637775 1455 ntBASIC13.67□□□□□ -0.22
VAMP1P23763 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
VAMP1P23763 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VAMP1P23763 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VAMP1P23763 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VAMP1P23763 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.67□□□□□ -0.22
VAMP1P23763 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VAMP1P23763 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
VAMP1P23763 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VAMP1P23763 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.67□□□□□ -0.22
VAMP1P23763 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.67□□□□□ -0.22
VAMP1P23763 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.67□□□□□ -0.22
VAMP1P23763 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.67□□□□□ -0.22
VAMP1P23763 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
VAMP1P23763 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.67□□□□□ -0.22
VAMP1P23763 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
VAMP1P23763 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.67□□□□□ -0.22
VAMP1P23763 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
VAMP1P23763 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms