Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.23■□□□□ 0.19
RETP07949 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.23■□□□□ 0.19
RETP07949 BTNL10-201ENST00000595971 695 ntBASIC16.23■□□□□ 0.19
RETP07949 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.23■□□□□ 0.19
RETP07949 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RETP07949 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.23■□□□□ 0.19
RETP07949 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.23■□□□□ 0.19
RETP07949 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.23■□□□□ 0.19
RETP07949 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.23■□□□□ 0.19
RETP07949 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.23■□□□□ 0.19
RETP07949 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 AL391005.1-201ENST00000623953 2435 ntBASIC16.23■□□□□ 0.19
RETP07949 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.23■□□□□ 0.19
RETP07949 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RETP07949 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RETP07949 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RETP07949 AC092171.3-201ENST00000610122 2651 ntBASIC16.22■□□□□ 0.19
RETP07949 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RETP07949 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RETP07949 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.22■□□□□ 0.19
RETP07949 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.22■□□□□ 0.19
RETP07949 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.22■□□□□ 0.19
RETP07949 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
RETP07949 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RETP07949 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.22■□□□□ 0.19
RETP07949 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.22■□□□□ 0.19
RETP07949 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RETP07949 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RETP07949 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RETP07949 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RETP07949 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RETP07949 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.22■□□□□ 0.19
RETP07949 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.22■□□□□ 0.19
RETP07949 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.22■□□□□ 0.19
RETP07949 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.22■□□□□ 0.19
RETP07949 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.22■□□□□ 0.19
RETP07949 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.22■□□□□ 0.19
RETP07949 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RETP07949 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.22■□□□□ 0.19
RETP07949 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.22■□□□□ 0.19
RETP07949 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.22■□□□□ 0.19
RETP07949 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.22■□□□□ 0.19
RETP07949 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.22■□□□□ 0.19
RETP07949 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.22■□□□□ 0.19
RETP07949 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RETP07949 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.22■□□□□ 0.19
RETP07949 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RETP07949 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RETP07949 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
RETP07949 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RETP07949 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RETP07949 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RETP07949 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.22■□□□□ 0.19
RETP07949 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RETP07949 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.22■□□□□ 0.19
RETP07949 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RETP07949 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RETP07949 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RETP07949 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
RETP07949 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RETP07949 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RETP07949 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RETP07949 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.21■□□□□ 0.19
RETP07949 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RETP07949 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RETP07949 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RETP07949 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RETP07949 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RETP07949 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RETP07949 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.21■□□□□ 0.19
RETP07949 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RETP07949 BRWD1P1-201ENST00000401091 371 ntBASIC16.21■□□□□ 0.19
RETP07949 AC098850.1-201ENST00000419919 790 ntBASIC16.21■□□□□ 0.19
RETP07949 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.21■□□□□ 0.19
RETP07949 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.21■□□□□ 0.19
RETP07949 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RETP07949 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.21■□□□□ 0.19
RETP07949 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.21■□□□□ 0.19
RETP07949 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.21■□□□□ 0.19
RETP07949 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.21■□□□□ 0.19
RETP07949 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RETP07949 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.21■□□□□ 0.19
RETP07949 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RETP07949 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RETP07949 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RETP07949 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RETP07949 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RETP07949 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RETP07949 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RETP07949 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RETP07949 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RETP07949 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms