Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.55□□□□□ -0.24
SIX6O95475 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SIX6O95475 RNF126P1-202ENST00000569893 925 ntBASIC13.55□□□□□ -0.24
SIX6O95475 MIR4492-201ENST00000581627 80 ntBASIC13.55□□□□□ -0.24
SIX6O95475 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.55□□□□□ -0.24
SIX6O95475 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SIX6O95475 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SIX6O95475 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SIX6O95475 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SIX6O95475 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SIX6O95475 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SIX6O95475 FGD5P1-202ENST00000614866 2498 ntBASIC13.55□□□□□ -0.24
SIX6O95475 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SIX6O95475 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SIX6O95475 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SIX6O95475 TOP3BP1-201ENST00000420768 1380 ntBASIC13.55□□□□□ -0.24
SIX6O95475 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SIX6O95475 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.55□□□□□ -0.24
SIX6O95475 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.55□□□□□ -0.24
SIX6O95475 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.55□□□□□ -0.24
SIX6O95475 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SIX6O95475 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SIX6O95475 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SIX6O95475 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SIX6O95475 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.55□□□□□ -0.24
SIX6O95475 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SIX6O95475 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.55□□□□□ -0.24
SIX6O95475 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SIX6O95475 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SIX6O95475 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SIX6O95475 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SIX6O95475 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SIX6O95475 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 AL592424.1-201ENST00000563624 1536 ntBASIC13.54□□□□□ -0.24
SIX6O95475 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 AC008677.1-201ENST00000519230 1561 ntBASIC13.54□□□□□ -0.24
SIX6O95475 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.54□□□□□ -0.24
SIX6O95475 AC004817.3-201ENST00000602957 2129 ntBASIC13.54□□□□□ -0.24
SIX6O95475 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.54□□□□□ -0.24
SIX6O95475 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SIX6O95475 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.54□□□□□ -0.24
SIX6O95475 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.54□□□□□ -0.24
SIX6O95475 TSPY7P-201ENST00000431358 1114 ntBASIC13.54□□□□□ -0.24
SIX6O95475 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.54□□□□□ -0.24
SIX6O95475 AL359075.1-203ENST00000462729 1002 ntBASIC13.54□□□□□ -0.24
SIX6O95475 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.54□□□□□ -0.24
SIX6O95475 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SIX6O95475 AC140113.3-201ENST00000605663 199 ntBASIC13.54□□□□□ -0.24
SIX6O95475 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.54□□□□□ -0.24
SIX6O95475 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.54□□□□□ -0.24
SIX6O95475 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.54□□□□□ -0.24
SIX6O95475 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SIX6O95475 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SIX6O95475 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.54□□□□□ -0.24
SIX6O95475 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SIX6O95475 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.54□□□□□ -0.24
SIX6O95475 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
SIX6O95475 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SIX6O95475 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.54□□□□□ -0.24
SIX6O95475 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.54□□□□□ -0.24
SIX6O95475 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SIX6O95475 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SIX6O95475 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SIX6O95475 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SIX6O95475 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
SIX6O95475 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 AJ011931.1-201ENST00000618749 2492 ntBASIC13.53□□□□□ -0.24
SIX6O95475 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SIX6O95475 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
SIX6O95475 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
SIX6O95475 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.53□□□□□ -0.24
SIX6O95475 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms