Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.41■□□□□ 0.22
CAPN8A6NHC0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 AC015922.1-201ENST00000421102 1152 ntBASIC16.41■□□□□ 0.22
CAPN8A6NHC0 GPS2P2-201ENST00000430745 888 ntBASIC16.41■□□□□ 0.22
CAPN8A6NHC0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 SPTSSB-204ENST00000617024 1292 ntBASIC16.41■□□□□ 0.22
CAPN8A6NHC0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.41■□□□□ 0.22
CAPN8A6NHC0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 AC092384.3-202ENST00000564646 2873 ntBASIC16.4■□□□□ 0.22
CAPN8A6NHC0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 HLA-H-201ENST00000383620 1096 ntBASIC16.4■□□□□ 0.22
CAPN8A6NHC0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 HLA-V-201ENST00000429037 534 ntBASIC16.4■□□□□ 0.22
CAPN8A6NHC0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 AC069262.1-201ENST00000539058 672 ntBASIC16.4■□□□□ 0.22
CAPN8A6NHC0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 AL359881.2-201ENST00000602973 570 ntBASIC16.4■□□□□ 0.22
CAPN8A6NHC0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 AL592424.1-201ENST00000563624 1536 ntBASIC16.4■□□□□ 0.22
CAPN8A6NHC0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN8A6NHC0 REXO1L8P-201ENST00000604378 1897 ntBASIC16.39■□□□□ 0.22
CAPN8A6NHC0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
CAPN8A6NHC0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN8A6NHC0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN8A6NHC0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN8A6NHC0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.39■□□□□ 0.21
CAPN8A6NHC0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.39■□□□□ 0.21
CAPN8A6NHC0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN8A6NHC0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.39■□□□□ 0.21
CAPN8A6NHC0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN8A6NHC0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms