Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 FAM220BP-201ENST00000377689 816 ntBASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 UPF3AP3-201ENST00000420996 769 ntBASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 RNA5SP410-201ENST00000516285 106 ntBASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 AC024267.1-201ENST00000582320 895 ntBASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 AL513210.1-201ENST00000629608 234 ntBASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 AC084121.4-201ENST00000641598 221 ntBASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 AF228730.8-201ENST00000642140 221 ntBASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC162PA2VCL2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 AC004461.1-201ENST00000412461 403 ntBASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 AC092865.5-201ENST00000545435 363 ntBASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCDC162PA2VCL2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.14■□□□□ 0.18
CCDC162PA2VCL2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC162PA2VCL2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC162PA2VCL2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC162PA2VCL2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC162PA2VCL2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
CCDC162PA2VCL2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC162PA2VCL2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC162PA2VCL2 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC162PA2VCL2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC162PA2VCL2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.14■□□□□ 0.17
CCDC162PA2VCL2 AC005237.2-201ENST00000434368 219 ntBASIC16.14■□□□□ 0.17
CCDC162PA2VCL2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC162PA2VCL2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms