Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NCLNQ969V3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
NCLNQ969V3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.74■□□□□ 0.11
NCLNQ969V3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.74■□□□□ 0.11
NCLNQ969V3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.74■□□□□ 0.11
NCLNQ969V3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCLNQ969V3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCLNQ969V3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.74■□□□□ 0.11
NCLNQ969V3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.74■□□□□ 0.11
NCLNQ969V3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCLNQ969V3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.74■□□□□ 0.11
NCLNQ969V3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NCLNQ969V3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCLNQ969V3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.74■□□□□ 0.11
NCLNQ969V3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCLNQ969V3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NCLNQ969V3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NCLNQ969V3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NCLNQ969V3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCLNQ969V3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.74■□□□□ 0.11
NCLNQ969V3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.74■□□□□ 0.11
NCLNQ969V3 PDPK2P-202ENST00000562415 1191 ntBASIC15.74■□□□□ 0.11
NCLNQ969V3 AC005412.3-201ENST00000580309 715 ntBASIC15.74■□□□□ 0.11
NCLNQ969V3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.74■□□□□ 0.11
NCLNQ969V3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.74■□□□□ 0.11
NCLNQ969V3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.74■□□□□ 0.11
NCLNQ969V3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.74■□□□□ 0.11
NCLNQ969V3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
NCLNQ969V3 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.74■□□□□ 0.11
NCLNQ969V3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.74■□□□□ 0.11
NCLNQ969V3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.74■□□□□ 0.11
NCLNQ969V3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCLNQ969V3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCLNQ969V3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NCLNQ969V3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.74■□□□□ 0.11
NCLNQ969V3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCLNQ969V3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.74■□□□□ 0.11
NCLNQ969V3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCLNQ969V3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCLNQ969V3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.74■□□□□ 0.11
NCLNQ969V3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.74■□□□□ 0.11
NCLNQ969V3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.74■□□□□ 0.11
NCLNQ969V3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.74■□□□□ 0.11
NCLNQ969V3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NCLNQ969V3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
NCLNQ969V3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
NCLNQ969V3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
NCLNQ969V3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NCLNQ969V3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NCLNQ969V3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NCLNQ969V3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCLNQ969V3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCLNQ969V3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.73■□□□□ 0.11
NCLNQ969V3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
NCLNQ969V3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.73■□□□□ 0.11
NCLNQ969V3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCLNQ969V3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCLNQ969V3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCLNQ969V3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCLNQ969V3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NCLNQ969V3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.73■□□□□ 0.11
NCLNQ969V3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCLNQ969V3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.73■□□□□ 0.11
NCLNQ969V3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCLNQ969V3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.73■□□□□ 0.11
NCLNQ969V3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NCLNQ969V3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCLNQ969V3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.73■□□□□ 0.11
NCLNQ969V3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.73■□□□□ 0.11
NCLNQ969V3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NCLNQ969V3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.73■□□□□ 0.11
NCLNQ969V3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.73■□□□□ 0.11
NCLNQ969V3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.73■□□□□ 0.11
NCLNQ969V3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.73■□□□□ 0.11
NCLNQ969V3 AC010327.4-202ENST00000591484 748 ntBASIC15.73■□□□□ 0.11
NCLNQ969V3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NCLNQ969V3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCLNQ969V3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCLNQ969V3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCLNQ969V3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.73■□□□□ 0.11
NCLNQ969V3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NCLNQ969V3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.73■□□□□ 0.11
NCLNQ969V3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NCLNQ969V3 AL603832.2-201ENST00000566195 2125 ntBASIC15.73■□□□□ 0.11
NCLNQ969V3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.73■□□□□ 0.11
NCLNQ969V3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCLNQ969V3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NCLNQ969V3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.73■□□□□ 0.11
NCLNQ969V3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
NCLNQ969V3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCLNQ969V3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NCLNQ969V3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NCLNQ969V3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NCLNQ969V3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NCLNQ969V3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NCLNQ969V3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
NCLNQ969V3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
NCLNQ969V3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCLNQ969V3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NCLNQ969V3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms