Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF4Q92544 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF4Q92544 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF4Q92544 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF4Q92544 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 AC027369.6-201ENST00000525520 931 ntBASIC15.28■□□□□ 0.04
TM9SF4Q92544 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 RARRES2P9-201ENST00000565168 469 ntBASIC15.28■□□□□ 0.04
TM9SF4Q92544 AC003101.2-201ENST00000612557 442 ntBASIC15.28■□□□□ 0.04
TM9SF4Q92544 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF4Q92544 AL391256.1-201ENST00000443260 1855 ntBASIC15.28■□□□□ 0.04
TM9SF4Q92544 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF4Q92544 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF4Q92544 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF4Q92544 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF4Q92544 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF4Q92544 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF4Q92544 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF4Q92544 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TM9SF4Q92544 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.27■□□□□ 0.04
TM9SF4Q92544 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TM9SF4Q92544 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.27■□□□□ 0.04
TM9SF4Q92544 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TM9SF4Q92544 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TM9SF4Q92544 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TM9SF4Q92544 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TM9SF4Q92544 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.27■□□□□ 0.04
TM9SF4Q92544 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.27■□□□□ 0.04
TM9SF4Q92544 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TM9SF4Q92544 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TM9SF4Q92544 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TM9SF4Q92544 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.27■□□□□ 0.04
TM9SF4Q92544 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.27■□□□□ 0.04
TM9SF4Q92544 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TM9SF4Q92544 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.27■□□□□ 0.04
TM9SF4Q92544 TUBB8P12-201ENST00000308911 1335 ntBASIC15.27■□□□□ 0.04
TM9SF4Q92544 TUBB7P-202ENST00000428444 1305 ntBASIC15.27■□□□□ 0.04
TM9SF4Q92544 TUBB8P7-204ENST00000567960 1332 ntBASIC15.27■□□□□ 0.04
TM9SF4Q92544 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.27■□□□□ 0.04
TM9SF4Q92544 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TM9SF4Q92544 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TM9SF4Q92544 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TM9SF4Q92544 HLA-H-201ENST00000383620 1096 ntBASIC15.27■□□□□ 0.04
TM9SF4Q92544 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.27■□□□□ 0.04
TM9SF4Q92544 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.27■□□□□ 0.04
TM9SF4Q92544 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.27■□□□□ 0.04
TM9SF4Q92544 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.27■□□□□ 0.04
TM9SF4Q92544 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.27■□□□□ 0.04
TM9SF4Q92544 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.27■□□□□ 0.04
TM9SF4Q92544 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TM9SF4Q92544 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.27■□□□□ 0.03
TM9SF4Q92544 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TM9SF4Q92544 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TM9SF4Q92544 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TM9SF4Q92544 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TM9SF4Q92544 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TM9SF4Q92544 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TM9SF4Q92544 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TM9SF4Q92544 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TM9SF4Q92544 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TM9SF4Q92544 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.27■□□□□ 0.03
TM9SF4Q92544 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TM9SF4Q92544 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.27■□□□□ 0.03
TM9SF4Q92544 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TM9SF4Q92544 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TM9SF4Q92544 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TM9SF4Q92544 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TM9SF4Q92544 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TM9SF4Q92544 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TM9SF4Q92544 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 AL035456.1-201ENST00000456064 1369 ntBASIC15.26■□□□□ 0.03
TM9SF4Q92544 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 TSPY26P-202ENST00000565928 3884 ntBASIC15.26■□□□□ 0.03
TM9SF4Q92544 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms